Conexivisphaera calida: NAS2_0232
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Entry
NAS2_0232 CDS
T06635
Name
(GenBank) RNA-2',3'-PO4:RNA-5'-OH ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ccai
Conexivisphaera calida
Brite
KEGG Orthology (KO) [BR:
ccai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccai03016
]
NAS2_0232
Enzymes [BR:
ccai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
NAS2_0232
Transfer RNA biogenesis [BR:
ccai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
NAS2_0232
Prokaryotic type
tRNA splicing ligases
NAS2_0232
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
BBE41627
UniProt:
A0A4P2VBX8
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All DBs
Position
complement(216311..217741)
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AA seq
476 aa
AA seq
DB search
MIDPYTWEIPKDTREDMKVPVRIYASEALLEKMRGDRTLLQAVNVSTMMGIQKWAVVLPD
AHEGYGFPVGGVAAVDAEEGAVSPGGVGYDINCGVRLLRTNLSVEDVKPRLRELLDQIYR
LVPSGVGSEGIIRVSTHELDDVARLGMRWAVEHGYGWERDLEHAEEGGRIPWADPGKVSD
IAKKRGAEQLGTLGSGNHFLELEVVDRVEDERAARAMGIRGPGQVMVLIHTGSRGYGHQV
CSDYLRIMERVMAREGIRLPDRELAYGPISAKEVQDYLGAMASAANFAWANRQMITHWVR
EAFEKVYGRDSESLGLELVYDVAHNIVKLEEHEVEGVHRKVYVHRKGATRSFPPGSEQVP
PDYRDVGQPVLIPGSMGTGSWVMVGLRTSMDRSFGSAAHGAGRFMSRAAAKRKHRYGDLV
EELESGGILIRASSKETVVEEAPDAYKDVDAVADATHFAGLAKKAVRLRPLGVVKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatagacccctacacgtgggagatacccaaggataccagggaggacatgaaggttcca
gtgcgcatctatgcgtcggaagcgctcctagagaaaatgcgtggcgatagaactctcctg
caggcggtgaacgttagcaccatgatgggcatacagaagtgggcagtggtcctgcctgac
gcgcacgagggctatggattcccggtggggggagtagcggctgtggatgctgaggagggc
gccgtgagcccaggtggggtaggatacgatataaactgtggagtcaggttgctcaggaca
aatctcagcgtggaggacgtgaagccgaggctgagggagctactggaccagatatacaga
cttgtgccgagcggcgtcgggagcgaggggataatccgtgtatcaacgcacgagctcgac
gacgtggccagactgggtatgagatgggcggtggagcatggatatgggtgggaacgggac
ctggaacacgcggaggagggaggcaggattccatgggcagatcctggcaaggtgagcgac
atcgccaagaagaggggggctgagcagctgggcaccctggggagcggcaatcacttccta
gagcttgaggtcgtggatcgcgttgaggatgaacgggcggcacgcgccatggggataagg
ggaccgggacaggtgatggtgctcatacacacggggagcaggggatacggtcatcaggtg
tgcagtgattacctgaggataatggagcgcgtgatggccagggagggcatcaggctacct
gatagggagctggcgtacggtcccatcagcgccaaggaggtccaggattacctgggtgca
atggccagcgcggcgaacttcgcgtgggccaacaggcagatgataacgcactgggtcagg
gaggcattcgagaaggtctacggaagagattcagagtcgctcgggctggagctggtctac
gatgtggcgcacaatatagtgaagctagaagagcacgaggttgaaggtgtacataggaag
gtctacgtgcacaggaagggcgcgacgcgctcgttcccgcccggctcggagcaggtacca
cctgactacagggacgtgggacaacccgtcttgatacctggcagcatgggaaccggcagc
tgggtgatggtgggccttcggactagcatggataggagcttcggcagcgccgcgcatggt
gcagggcgtttcatgagcagggcggccgctaagaggaagcaccggtatggagatcttgtg
gaggaactcgagagcgggggcatattgatcagggcatcaagtaaggagacggtggtggag
gaggcaccggatgcgtacaaggacgtcgacgccgtggcagatgccacccacttcgcggga
ttagctaaaaaggcagttcggctgaggcctctgggggtggtgaagggttag
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