Conexivisphaera calida: NAS2_0428
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Entry
NAS2_0428 CDS
T06635
Name
(GenBank) Transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
ccai
Conexivisphaera calida
Pathway
ccai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAS2_0428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccai03021
]
NAS2_0428
Transcription machinery [BR:
ccai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NAS2_0428
Prokaryotic type
Archaeal type
TFB
NAS2_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_11
HTH_AsnC-type
Sigma70_r4
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
HTH_3
Sigma70_r4_2
HEF_HK
HTH_24
BLOC1S3
Trm112p
ORC6
Zn_ribbon_tTFIIB
CggR_N
HTH_19
RB_B
Phage_tail_S
Ribosomal_S27e
Lar_restr_allev
zf-CCHC_5
Motif
Other DBs
NCBI-ProteinID:
BBE41818
UniProt:
A0A4P2VKU0
LinkDB
All DBs
Position
388385..389374
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AA seq
329 aa
AA seq
DB search
MVYGPSFVEYEPGSRCPRCGKGTLILDPNTGELTCSDCGFVVRERIEDPGQEWRAFSKEE
KEDRSRAGVPLSLAMHDMGLATVIGPRDKDASGKPLEAPVRSMMQRLRTWNSRSQVHEPV
DRNLRQAFNELDTLADKLSVSQTIVERAAYVYRKALEKGLVRGRSISGLIAASLYAACRA
LETPRTLKDIAEVSGLKKKDIARCYRLLVRELDLRMPIADPVKSISRIASKAGLSERVQR
RAVELLRRASEIRISAGKDPMGMAAAALYIACVLENENKTQKEIAEAAGVTEVTIRNRYK
GLKAALGLDEALAVAEAKRMKAKEEASSS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
ttggtctatgggccaagtttcgtggagtatgagcccgggtccagatgccccaggtgcgga
aagggcactctgatcctagatccaaatacaggggaactcacctgctccgactgcgggttc
gtcgtcagggagaggatagaggatcccggacaggagtggcgcgcgttcagcaaggaggag
aaggaggacaggagccgcgcgggcgttccgctctcgctcgccatgcacgacatggggctc
gccacggtcataggtccgagggacaaggacgccagcgggaagcccctcgaggcacccgtg
aggagcatgatgcagaggctcaggacttggaacagcaggagccaggtccacgagccggtc
gacaggaacctcaggcaggcgttcaatgaactggacacgctcgccgacaagctcagcgta
tcccagactatagtggagagggccgcctacgtgtacaggaaggccctggagaagggactc
gtcaggggcaggagcataagcggcctgatagcggcctccctctacgcggcgtgcagggcc
ctcgagacgcccaggaccctcaaggacatagctgaggtcagcggcctgaagaagaaggac
atagccaggtgctacaggctcctggtccgcgagctggacctcaggatgcccatagctgat
cccgtgaagtcgatcagcaggatagccagcaaggccggtctcagcgagagggtccagagg
cgcgcagtggagctcctcaggagggcatcggagatacggatatccgcgggcaaggacccg
atgggcatggctgccgcggcgctctacatagcatgtgtgctcgagaacgagaacaagact
cagaaggagatagctgaggcagccggcgtgacggaggtcacgataaggaaccgctacaag
ggcctcaaggcggcgcttggactagacgaggcgctcgccgtcgcggaggccaagaggatg
aaggcaaaggaagaggccagctccagctga
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