Conexivisphaera calida: NAS2_1115
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Entry
NAS2_1115 CDS
T06635
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ccai
Conexivisphaera calida
Pathway
ccai03410
Base excision repair
ccai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAS2_1115
03430 Mismatch repair
NAS2_1115
03440 Homologous recombination
NAS2_1115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccai03400
]
NAS2_1115
DNA repair and recombination proteins [BR:
ccai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NAS2_1115
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NAS2_1115
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NAS2_1115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBE42504
UniProt:
A0A4P2VD80
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All DBs
Position
1086349..1087551
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AA seq
400 aa
AA seq
DB search
MTGREEYEKALRKAVEAARHAHRAVVVHHDDADGLAAGAISLRTMDVIGLKARAICIEKM
HPAIVKMIHAMDADLFVYADIGSSRADLISEALREGQIVIVLDHHDPASVSREEILHLNP
ELYGYEGERDVSGSTAAYMLLRAVEPEVARELAWAAVVGSAEIPGPMRGLNAEALEDAER
AGDVERRQGRTGERYFVKAVQEYWDRASTIYTVLGSVGYYSGGPERAVAGILRREIPREE
ADKLEELRSRKFDELFSKVYREGLRKMKAIQWMDDGGVLSGLGTKVIGTFLSVLSHRRIV
DQEKYLVGMMEFSPEIPGLGRIDGRWIKASVRTPDALRRSVEAGRMPPASKLLEYAMDRI
GGVAEGHAYAASGLLPWDARDEFLALMDSGAMNEKGLSAP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagggaggagtacgagaaggcgctgaggaaagccgtggaggctgctaggcac
gcccatcgcgcggtggtagtgcaccacgacgacgcggacggccttgcggcgggggcaatc
tcgctgcggaccatggacgtgattggcctgaaggcgagggcaatttgcatagagaaaatg
cacccggcgatagtgaaaatgatacacgcgatggacgcggatctcttcgtgtacgcggac
atagggtccagcagggccgacctcatctcggaggcgctgcgcgagggccagatagtcatc
gtgctggatcatcacgatccagcgagcgtatcgcgtgaggagatcctgcacttaaatcct
gagctctacggttacgagggcgagcgcgacgtgagcggttcgaccgcggcgtacatgctc
ctgagggcagtggagccggaggtggcgagggagctggcctgggcagcggtcgtgggcagc
gccgagatacccggtccaatgagggggctgaacgctgaggcgctggaggatgcggagagg
gcgggggacgtcgagaggaggcagggaaggactggggaaaggtacttcgtgaaggccgta
caggagtactgggacagggcttccacgatctacacggtactgggaagcgtcggctattac
agcggaggacctgagagggccgtggcgggaatcctgcggagggaaatcccgagggaggag
gcggacaagctggaggagctgcgctcgaggaaattcgatgagctgttctccaaggtgtac
agggagggcctgaggaagatgaaggccatacagtggatggacgacggtggcgtcctgagc
ggcctgggcacgaaggtgataggaactttcctcagcgtcctgagccatagaaggatcgtc
gaccaagagaagtacttggtggggatgatggaattcagcccggagatacccgggctcggc
agaatagatggtagatggataaaggcgtcggtcaggaccccagatgcgctgcgcaggtcc
gtcgaggctggacgcatgccgcccgcgtccaagttgctcgaatacgccatggatagaata
ggcggcgtcgcggaggggcatgcatatgcggcgagcgggctcctgccgtgggacgcgcgc
gatgaattcctggcgctgatggactccggtgcgatgaatgaaaaagggttatcagctcca
tga
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