Cajanus cajan (pigeon pea): 109787755
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Entry
109787755 CDS
T04868
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X2
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109787755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109787755
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109787755
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109787755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
ApbE
Motif
Other DBs
NCBI-GeneID:
109787755
NCBI-ProteinID:
XP_020201905
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKSAEFKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSK
EGLGQQPKTDPREKAKSETRDWLNNVVGELESQIDSFEAELEGLSVKKGKNRPPRLTHLE
TSITRHKAHIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDDLYSS
LPLDKVESLEDIVTIPPGPAKVAPVLSLKPSVAASASASQTSEQADDTASQDSNSDIGAR
TPPPKSSVVSPTTTTPTGNPASPVSMNVPVPNLSSAPAIVTVMPGSNSVRSSLEINSVVS
ASSFVNHSSTVKEEDISFPGQRPSPSLSDVALVRNISRNSLSNQATNNIPLVSGNMVSSN
GPVGSIPSASEITKRNILVADDRLGSNGMVQPLVSPLSNRIVPQVARANDGTSSVDSSNV
NEAATVSGRVFSPSAVPGMQWRPGSPFQNQNDGQIRARPEIVPDQRERYLQKYQQVQQQV
QQQGQGSLLNMPTFAGGNHKQFSAQQQNPLLQQFNAQGSSVTSQSSVGLGVQSPGLSGIA
STSLPQPPNSVHSPSSQQSLLSAVSKDSDLGNSKVEEPQHIFPDDSGTESTTSTGIGKNF
MNEDELKSTYAVDSPVGVPASIPEPAQTSRDIDLSPGQPLQSNQRTANLGVIGRSSIDLG
TGDNFSASIANSGGVRDQLYNLQMLEASHLKLPQPKDSERPRTYTPKHPTITPPSYPQVQ
APIVNNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQR
HEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTDFTFEYNYLEDEPIV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcggaaacttcagggcgaaattgatcgtgttcttaagaaggttcaggaa
ggcgtcgatgtcttcgatagcatctggaacaaggtttacgacacggacaatgcgaaccag
aaggagaagttcgaggcagacctgaagaaggagattaagaagctgcagaggtatagggac
cagattaagacttggattcagtccagtgagatcaaagacaagaagtccgctgaattcaaa
gacaagaaggttagtgcctcgtatgagcaggctctagtggatgcccgcaaacttattgag
cgtgaaatggaaagattcaagatttgtgagaaggagacaaagacaaaagcattctccaaa
gaaggcttggggcaacagcctaaaactgatcctagagagaaggctaaatcagagacaagg
gattggttgaacaatgtggttggggagttagaatctcagattgatagctttgaagctgaa
cttgaaggactttctgtaaagaaaggaaagaacaggccacccagattgacacatctagag
acatcaattactcgacacaaggctcatataaagaaatgtgaatttatcttgaggctacta
gataatgatgaactaagtccagaacaggttaatgatgtaaaagatttcctggatgactat
gtagagcgtaatcaggaggacttcgaagaatttagtgatgttgatgacctatatagttca
ttacccttagacaaggtggagtcacttgaagatatcgttacaattccccctggtcctgct
aaggttgcacctgttcttagcttgaagccttctgtggcagcatcagcttcagcatcacaa
acatctgagcaagctgatgatactgcatcccaggatagcaattctgatattggtgcaaga
actccacctcctaaaagtagtgtagttagtcctactactacaacaccaacagggaatcct
gcttctcctgtttctatgaatgttccagtgcctaacttgtcgagtgcaccagctattgta
acagtcatgcctggttcaaattctgttcggagctccttggagattaacagtgttgtcagt
gcttcatcttttgtaaatcattctagcactgtgaaggaggaagatattagtttccctggc
caaagaccatctccatcgctttctgatgttgcacttgtaaggaacatcagcagaaacagc
ctatcaaatcaagcaacaaataacataccacttgtttctggcaatatggtttccagcaat
gggccggttggttcaatcccttcagcatctgaaataaccaagagaaacatattggtagct
gacgatcgacttggaagcaatgggatggtgcagcctcttgtatcccccttaagtaacaga
atcgtgcctcaggttgcaagggctaatgatggaacttcttcagttgactctagtaatgtc
aacgaagctgcaactgtctctgggagagttttctccccttctgctgttcctggcatgcaa
tggagacctggaagccccttccagaaccagaatgatgggcagattcgtgcaagacctgaa
atagttcctgatcaaagggaaagatatttgcagaagtatcaacaagtgcagcaacaagtg
cagcagcaaggtcaaggttcccttcttaatatgccaacttttgcaggagggaatcataag
cagttttctgctcagcaacaaaatcctctcttacagcagttcaacgctcaaggctcttct
gttacttctcaatctagtgtgggacttggagtccagtcaccaggtcttagtggcattgct
tccacctcattaccacagccacccaattctgtccattccccatctagccaacaatcattg
ctgtcagctgtttctaaagattcagatcttggcaattctaaggttgaagagccgcaacat
atttttcctgatgattcggggactgaatctactactagtactgggattggcaagaatttc
atgaatgaagatgagttgaaatccacatatgctgttgactctcctgtaggagtacctgct
tctattccagagcctgctcagacttctagagatattgatttgtctcctggccaaccttta
caatcaaatcagcgtactgctaaccttggtgttataggaagaagttctattgatcttgga
actggtgacaactttagtgcatcaatcgctaattctggtggagttcgtgatcagttatat
aatttgcagatgcttgaggcatctcacctcaaacttccgcaacctaaggactcagaacgt
cctaggacctatactcctaaacaccctacgataacaccacctagttatcctcaagtacag
gcacctattgttaataatcctgccttttgggagagagtaggtctcgaaccatatggaact
gataccctgttctttgcattttactatcaacagaacacttaccaacaatatatggctgca
aaagagcttaagaagcagtcatggagatatcaccggaaatataacacatggtttcaacgg
catgaagagccaaaagttgcaacagatgaatacgagcagggaacatatgtgtactttgat
ttccatattgcaaatgatgatctgcagcatgggtggtgtcaaagaatcaaaactgacttc
acttttgaatataactatctcgaagatgagcctattgtctag
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