Cajanus cajan (pigeon pea): 109787904
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Entry
109787904 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109787904
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109787904
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
90S particles
Helicases
109787904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109787904
NCBI-ProteinID:
XP_020202091
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MDQPQLLHDPTFPLFKIPSKTPPKPPSLPTAAATATATVAAAERVETPDADADTFEDLGL
AEWAVTTCRELGMRKPRRVQQRCIPRVLEGRHVLGIDETGSGKTAAFALPILHRLAEHPF
GVFALVVTPTRELAFQLAEQFRALGSAVRLRIAVVVGGMDMLRQTKELAARPHLVIATPG
RIHLLLRDNPDIPPVFSRTKYLVLDEADRVLDVGFQEELKFIFQCLPENRQNLFFSATTT
SNLQKLRDRYRDKMYVFEAYEGFKTVETLKQQVIFIPRKVKDVYLMHILSKMEDMDIRSA
IVFVSTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFKSGKVSVLLATDVASRG
LDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVELIREIEALIERQL
EMIEYKENEALSLMKKVFSAKNVAEMKMIDDGFEDKAKERKKQKLKMLAEKGLLKKRSKK
RKRNKEFAEEGEEQKKQVFSAKDVAEMKMTVEEGIGKKAKKGGKQKLKMPTEKGLLKKKK
VEGKK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaccccaactcttacacgacccaaccttcccactcttcaaaatcccaagcaaa
accccacccaaacccccctcactccccaccgccgccgccaccgccaccgccaccgtcgcc
gccgccgagcgcgtcgaaacccccgacgctgacgccgacaccttcgaagacctcgggctc
gcggaatgggcggtgacgacgtgccgggagctcgggatgcggaagccgcggcgcgtgcag
cagcggtgcatcccgcgggtgctggagggccgccacgtgctaggcatcgacgagaccggc
agcgggaagacggcggccttcgcgctccccatcctgcaccgcctggccgagcaccccttc
ggcgtcttcgccctcgtcgtcacgcccacgcgcgagctcgcgttccagctcgccgagcag
ttccgcgcgctcggctccgccgtgcgcctccgcatcgcggtggtcgtcggcggcatggac
atgctccggcagacgaaggagttggccgcgaggccgcacctcgtcatcgccacccctggc
aggattcacctcttgctccgcgataaccctgatattcctcctgttttctccagaactaag
taccttgtcttggatgaagcagatcgagtcctggatgttggttttcaggaagaattgaag
tttatttttcaatgcttaccagaaaatcggcaaaatcttttcttttctgcaacaactaca
agtaatctgcagaagttgcgtgatcgttaccgagataagatgtatgtctttgaggcatat
gaaggctttaaaacagttgaaacacttaagcaacaggttatattcattcctagaaaggtg
aaggatgtatatttgatgcacattttgtctaaaatggaagatatggacattcggtctgcc
atcgtatttgtctcaacatgcagagattgtcatcgtttaagtttaatgcttgaagtgctt
gatcaagaagcagcagctctatattcattcaaatcacaagctcagaggcttgaagcactt
catcaatttaaatcaggaaaggtttctgtactgcttgctactgatgttgctagtcgcggt
ttggatattcctacagttgaccttgttatcaattatgatgttccaaggtttccacgagat
tatattcatcgtgtaggtcgtacagcaagagcaggtagagggggactggctttgagcctt
gtcacccagaatgatgttgaacttattcgtgaaattgaagctcttattgagcggcaactt
gaaatgattgagtacaaggaaaatgaggcgctttctctcatgaaaaaggttttcagtgct
aagaatgtagcggaaatgaagatgatagatgatggctttgaggataaagctaaagagcgg
aaaaaacagaagctgaaaatgctagcagagaaaggattgttaaagaaaagaagtaaaaag
agaaaacgaaataaagagtttgcagaggaaggggaagaacaaaaaaaacaggttttcagt
gctaaggatgtggcagaaatgaagatgacggtagaggagggcattgggaagaaagcaaaa
aaagggggtaaacaaaaactgaaaatgccaacagagaaaggtttgttaaagaaaaaaaaa
gttgaaggaaagaaataa
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