KEGG   Cajanus cajan (pigeon pea): 109788074
Entry
109788074         CDS       T04868                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109788074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109788074
   03041 Spliceosome [BR:ccaj03041]
    109788074
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109788074
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109788074
Spliceosome [BR:ccaj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109788074
SSDB
Motif
Pfam: RRM_1 RRM_7 FANCI_S1-cap MgtE_N Cut8
Other DBs
NCBI-GeneID: 109788074
NCBI-ProteinID: XP_020202300
LinkDB
Position
Unknown
AA seq 386 aa
MDFSNAKKRKVEENGDADSPPPQSRDEATVSAAATLSAEDIRKILQPLSSDQLVDLLQSA
SLRHPDVLDAVRAVADRDSTSRKLFVRGLAGETTTETLRGVFSAYGDLDEAIVIFDKATG
RSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAAAGGPGGSGDVSLRKVFVGNVPF
ELSSERLLDEFLKFGEVEEGPLGFDKSSGKTKGFAFFVYKTEEGARASLVEPLKTIDGHQ
VICKLAVDNKKAKPFGGDQHQHQQQQQNQHQHQQQQVPQVQQQGPVVQYGGYGVNGYGMQ
HSVASYNNQAPVGGYGHVGAAYGNAQMSGPVSSGDYGGRVPPNSAGGFPDGSQYGFPPPS
ALQPQQQQIMPMARPPPTGMYQQPYY
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggacttctccaacgccaagaagcgcaaagtggaagagaacggcgacgccgattctccg
ccgccgcagtcccgcgacgaagccacggtctccgccgccgccactctctccgcggaagac
atacgcaaaatcctccaacccttatcctcggaccaactcgtcgacctcctccaatcggcg
tcgctccgccaccccgacgtcctcgacgccgtgcgcgccgtcgcggaccgcgactccacc
tcccggaagctcttcgtgcgcggcctcgccggggagaccaccaccgagacgctgcgcggc
gtgttttccgcgtacggcgacctcgacgaggccatagtcattttcgacaaggccactggg
cgctccaagggctacggcttcgtggtgtttcgccacgtggatggtgctatccttgcgctg
aaggatcccagcaagaagattgatggccgcatgacggtgacgcagctcgccgccgccggc
ggtcccggtggctccggcgatgtctccctgaggaaggtctttgtagggaacgtccccttt
gaactttcctcggagcgtcttctggacgagttcctcaagtttggggaagtggaggaaggg
cctctagggttcgacaaatctagcggcaaaaccaagggttttgccttctttgtttacaag
acagaggagggtgctcgagcttcactggtggaacctcttaagaccattgatgggcatcaa
gtcatatgcaagttggctgtggataacaaaaaggcgaaaccctttggtggggatcagcat
cagcatcaacagcaacagcaaaatcaacatcagcatcagcagcaacaggtgccgcaggtg
caacagcaagggcctgtggtgcagtatggtgggtatggcgtgaacggctacgggatgcag
cactcggtggcatcgtataataaccaggctccggttggtggatatggccatgttggtgca
gcgtatgggaatgcacagatgagtgggcctgtctcttctggtgactatggtgggagagtg
cctcccaattctgctggcgggtttcctgatggctcgcagtatggctttcctcctccctca
gcgttacaaccacagcaacaacaaattatgccaatggcgagacctcctccaactggaatg
taccaacagccctattattga

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