Cajanus cajan (pigeon pea): 109788135
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Entry
109788135 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109788135
03015 mRNA surveillance pathway
109788135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109788135
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109788135
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109788135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109788135
NCBI-ProteinID:
XP_020202386
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MAESSAAAPPPPPVTKSWADEADEESSAAATTEPEASSSVNVDALTIDDNKKNQPKLLDD
PDDSNIQAVTSGDTPYTSAATFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPH
RDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCICPTRELAIQNTEVLRKMGKYTGI
ASECAVPMDSRDALPIAKRAPIMAQVVIGTPGTIKKWMSFKKLGATRLKILVFDEADQML
AEDGFKDDSLRIMKEIERVNSNCQVLLFSATFNDTVKNFVSRTVKKDHNQLFVKKEELSL
DAVKQYKVHCPDELAKIEIIKDYIFEIGENVGQTIIFVRTRNSAKMLHNALVDFGYEVTS
IQGALDHEQRDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHTAEYSREP
EPDCEVYLHRVGRAGRFGRKGAVFNLICDERDARLMSKIENHFGTHVAEVRAQSVEEYKA
ALKEAGLLQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcctccgccgctgctcctccgccaccaccggtgaccaaaagctgggctgac
gaagccgacgaagaaagcagcgccgccgctaccaccgagcctgaagcctcctcctccgtc
aacgtcgacgcattaaccatcgacgacaacaagaagaatcagccgaagctgttggacgac
cccgacgactccaacatccaagcggttacctccggagacacgccgtacacgtcggcggcg
acgttcgaggaccttaacctgtcgccggagcttctgaaggggctctacgtggagatgaag
ttccagaagccgagtaagatccaggcgataagtttgccgatgatcctgagtccgccgcac
cgggacctgatcgcgcaggcgcacaacggctccggcaagaccacgtgttttgttcttggg
atgctgagtcgtgtggatccgaaggtgcaggctcctcaggctctctgcatctgccccacg
agggagcttgccattcagaacactgaggtgctccgcaagatgggcaagtacaccgggatt
gcctctgagtgtgctgtgcccatggatagccgtgatgccttgcccatcgccaaaagggcg
ccgattatggcgcaggtcgtgattgggactcccgggaccattaagaagtggatgagcttt
aagaaacttggggccaccaggttgaagattcttgttttcgacgaggctgatcaaatgctt
gctgaggatggatttaaagatgattccctgaggataatgaaagaaattgaaagggtcaat
tctaactgtcaggttcttttgttttctgctacatttaatgacacggtcaagaattttgtt
tcaagaacagtcaagaaggatcacaatcaactatttgtaaagaaagaggaactatcttta
gatgcagtgaagcaatataaagtgcattgtcctgatgaacttgctaagattgaaattata
aaagattacatatttgaaataggagagaatgtggggcaaaccatcatatttgtgcgcaca
agaaatagtgcaaaaatgttgcataatgctcttgttgattttggctatgaggttacatct
atacaaggtgctcttgatcatgaacagagagacaaaattgtcaaggagttcagagatggt
ttgactcaagttcttatatcaacagatgttcttgctcgtggttttgatcagcaacaggtt
aatttggtcatcaattatgatcttccagtgaaacacactgctgagtatagccgtgaacct
gagccggattgtgaagtctatttgcacagggttggcagagctgggcgttttgggaggaag
ggggctgtatttaacctgatatgtgatgaaagggatgcgaggctcatgtcaaagattgag
aaccattttggcactcatgttgctgaggtgcgagcacaaagtgttgaagaatataaagct
gctctcaaggaagccggtttactgcaatga
DBGET
integrated database retrieval system
