Cajanus cajan (pigeon pea): 109788372
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Entry
109788372 CDS
T04868
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaj03016
]
109788372
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
109788372
Transfer RNA biogenesis [BR:
ccaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109788372
Prokaryotic type
109788372
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7261
Motif
Other DBs
NCBI-GeneID:
109788372
NCBI-ProteinID:
XP_020202671
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Position
2:complement(5632751..5636496)
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AA seq
602 aa
AA seq
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MENSDTMLTTSSLPPPPPVAVEEPEPKKLKMSTTTSDDEECATTTGSKIRYKRHKVAIFF
AYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVDRLNSNLTSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALDP
CCHRDRETVMASLGSGNELVKCFECSERGRKVVGLVGNRKHNLELEAMDVDAGISSNKNV
VVDSSVTDDVGVSLSKVDDNHLNEASVNDNTGDVNSKTDIETVIPVREEGTPLNDESVKN
SDILEEEKVNGEDESTNGSGFCYGEKERERFNKILKYFVGTHNFHNFTTRTKAEDPAARR
YIISFNANITLVVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDKAFQQD
VNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKDYEKEAEEFKMKYIYSHISSTEQ
KEGTVALWLHSLNHRNYPDLRIVNEEAIPDNNRADIEEAIPDNKRADIVNDNKRAAIEEP
INDNKRAAIEEAINDNKRADIEETITDNKRVDIEEAVDDNKRADIEDAITDNKSADPEVM
TE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagatacaatgctgacaacttcatccttgcctccaccacctccagtagct
gtggaggagccagagcccaagaagttgaagatgtccaccacaacctctgatgatgaagaa
tgtgcaactaccacaggcagtaagataagatacaaacgccataaggtagctattttcttt
gcttactgtggtgttggctatcagggtatgcagaaaaaccctggtgcaaagaccattgaa
ggtgatctagaagaagctttatatgtgtctggagctgtacctgaacaggatcgtggaatt
cctaaacggtacgactgggctcgctctgctagaacagataaaggagttagtgctgttggt
caggttgtctcaggccgattctatattgatccacctggccttgttgaccgccttaattca
aatcttacctctcagataaggatctttggttacaagcgtgtgacaggttcttttaatgcc
aagaagttctgtgatcggaggaggtatgtctatctcattcctgtgtttgctcttgatcca
tgttgtcatcgtgatagagagactgtcatggctagtttgggatctggaaacgagcttgtt
aagtgtttcgagtgttctgagagaggtcgaaaggtggtaggattagttggtaatcgtaag
cacaatctggaactagaagctatggatgttgatgctggtatttcatcaaacaaaaatgtt
gtggttgattctagtgttacagatgatgtgggggtttctttgagcaaagttgatgataat
catttaaatgaggcatctgtgaatgataatacgggtgacgtgaactctaaaactgatatt
gagactgtgattcctgttcgtgaagagggtactcctttgaatgatgaatctgtaaaaaat
tcagacatccttgaggaagaaaaagtgaatggagaggatgagtctaccaatggaagtggg
ttctgttatggtgagaaggagagggagagatttaacaagattttaaagtattttgtaggg
actcataatttccataacttcaccactagaacaaaagctgaggaccctgctgctcgtcgt
tacattatttcattcaatgcaaacatcactcttgtagttgagggcatggaatttgtaaag
tgcgaggttgtgggacagagcttcatgcttcatcagatacgcaagatgattggtttggca
gtggcaatcatgagaaattgtgcaccggagtcacttattgacaaagcttttcagcaggat
gttaacattaatgtgcctactgcccctgaggttggattatatttggatgagtgcttcttt
tcttcatataaccagaagtggaaagatagccatgaagagttgtcaatgaaagattatgag
aaagaagctgaggagttcaaaatgaagtacatatattctcatatctcttccacggaacag
aaggaaggaactgttgctctttggttacattctttgaaccatagaaattatccagatctg
cgcattgtcaatgaggaagccatccctgataacaatagagctgatattgaggaagccatc
cctgataacaagagagctgatattgtcaatgataacaagagagctgctattgaagaaccc
atcaatgataacaagagagctgctattgaagaagccatcaatgataacaagagagctgat
attgaagaaaccatcactgataacaagagagttgatattgaagaagctgtcgatgataac
aagagagctgatattgaagatgccatcactgataacaagagtgctgatcctgaagttatg
actgagtga
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