Cajanus cajan (pigeon pea): 109788706
Help
Entry
109788706 CDS
T04868
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109788706
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109788706
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109788706
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109788706
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109788706
microRNA pathway
RISC loading complex
109788706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
109788706
NCBI-ProteinID:
XP_020203091
LinkDB
All DBs
Position
2:13197565..13214959
Genome browser
AA seq
922 aa
AA seq
DB search
MTDKVPDIEEAAEPPASFADVAKGIMTDKVPEIEEAAEPPASRQSSADVLHNLETEQMAP
TKYSIISRNGIGTTGKRIPLLVNLFKVDVNAPNPDTMFFQYSVTITFEDKRAVESKGIWR
KVIHRLYQMYSSELGGKRFAYDGGRALYTVGPLPLNKYEFKVLLEESFTKCSSAESPGVN
GSLCEKTKRSKHSFQSKTFIVEISFVAKIPLQSIALKEVESDALRVLDIVMRQRAANCGC
LLVRQSFFHDDSRNFTDIGAGVTAVSGFHSSFRPTQRGLSFNMDVSTTMIIKPGPVVDFL
LANQQVREPRYIDWAKAKKMLKNLRVQATHSNQKFKIYGFSEKPCIQQLFSMKVKNDNGN
NEGQTVDITVYEYFAKHRGIELTSSAYLPCLDVGKPNRPIYLPLELCALVSLQRYTKVLS
PMQRASLVEKSRQKPQDRIKILKNAVGNYCYDDDPVLAACGISIEKQLTLVEGRVLETPK
LKVGKNDDCFPNSGRWDFNKKTLLQPSHIDFWAVVNFSARCDTSYISRELIRCGMSKGIN
IERPYTLIEEEPQLRKSNPVTRVERMFDLLASKLTREPNLILCVLPERKNCDIYGPWKKK
CLSEIGVVTQCISPPLKITDQYLTNVLLKINSKLGGINSLLAIEHSGHLPLIKDTPTMIL
GMDVSHSSLGRSDIPSIAAVVGSRHWPLISRYRATVRMQASKLEMIDALFKPLENGSDDG
IIRELLLDFYQSSNGRKPTQFIVFRDGVSESQFKQVLDIEINQIIKAYQHLGETNVPKFT
VIVAQKNHHVKLFLANGPENVSPGTVVDTTITHPRNYDFYMCAHAGMIGTSKPVHYHVLL
DEIGFSADGLQDLIYSLSYVNQRSTIATSVVAPVSYAHHAAAQMGQFFNFDDLSETSDSE
GNIPIPELPRLHKNVRSSMFFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaagttcctgatattgaagaggctgctgagcctccggcttcatttgctgat
gtagcaaagggaataatgacagataaagttcctgagattgaagaagctgccgagcctcca
gcttcacgccaatcatctgctgatgtgctccataatttggaaacggagcaaatggctcct
acaaagtattctattatcagtaggaatgggattgggaccacagggaaacgcataccttta
cttgtgaatcttttcaaagttgatgttaatgctccaaatccagacacaatgtttttccag
tatagtgttactattactttcgaagataaaagagctgttgaaagcaagggaatttggaga
aaagtgattcatagactttaccaaatgtactcttctgaacttggtggcaaaaggtttgcc
tatgatggagggagagctttgtacacagtgggtcctctgccgctaaataaatatgaattc
aaggtgttgctggaggagtcttttactaaatgcagtagtgctgagagtcccggtgttaac
ggaagcctctgtgagaaaacaaaaaggtcaaaacattcttttcaatcaaagacattcata
gtggagattagttttgttgccaaaatacccctgcagtccattgccctcaaagaggtcgag
tcagatgctttgagagtgcttgatattgtaatgaggcagcgcgcagctaattgtgggtgt
ctcctggtaaggcaatctttttttcatgatgactcaagaaatttcaccgatattggggct
ggtgtaacagcagtctcgggttttcattcaagttttcgtcctacacagcgaggattgtct
ttcaatatggatgtttcaacaactatgatcataaaacctggacctgtagttgattttctg
ttagcaaaccagcaagtgagggaaccccgttatattgactgggcaaaggccaaaaaaatg
cttaaaaatttaagggtgcaagcaactcatagtaaccagaaatttaaaatttatggcttc
agtgagaaaccatgcattcaacaactttttagtatgaaggttaaaaacgataatggcaat
aatgaggggcagacagtagatattactgtatatgagtattttgccaaacatcgtggcata
gagctgacctcatctgcttatcttccatgtcttgatgtagggaagccaaatcggcccatt
taccttcccttggagctatgtgcacttgtttccctccaacggtatacaaaggtattatct
ccaatgcaaagagcatctttagttgaaaaatcacgccaaaagcctcaagatagaatcaaa
atcctgaaaaatgctgtaggaaattattgctacgatgatgatcctgttcttgctgcatgt
ggcatttctattgagaaacaattgacactggttgaaggtcgtgttcttgagacaccaaag
ttgaaggttggtaagaatgatgattgcttccccaatagtggaaggtgggactttaataag
aagacacttctacaaccatcgcatatcgatttttgggctgttgtaaacttttctgcacgt
tgtgatactagttacatttcaagggagctgatcagatgtggaatgagcaagggaattaac
attgaaaggccatatactttgatagaggaggaaccacagttgagaaaatctaatcctgtt
acaagggttgaaagaatgtttgacctgcttgcatcaaaacttacaagagaaccgaacctg
attctttgtgttctgccagaaaggaaaaattgtgatatatatgggccttggaaaaagaag
tgtctgagtgaaattggtgttgtcacacagtgcatttcccctcctctcaagatcactgat
caataccttactaatgtacttcttaaaatcaattctaagcttggaggaataaattctctg
ttggcaatagagcattctgggcatcttcccctgattaaagataccccaacaatgattttg
gggatggatgtctctcacagttcacttggtcgatcagatattccatcaattgcagctgtt
gttggatctcgacattggccactgatttcaaggtatagagcaactgtgagaatgcaggca
tctaagttggagatgattgatgctctattcaagccattggaaaatgggagtgatgatggt
attatcagagaattgcttttagatttctatcaatcaagtaatgggcgcaagccaactcaa
tttattgtcttcagggacggagttagtgaatcacaatttaaacaagttttggatatcgag
attaaccagataatcaaggcctatcaacatcttggtgagactaatgttcccaagttcacc
gtgattgtggcacagaaaaatcatcatgttaagctgtttctagctaatggaccggaaaat
gtttctcctgggacggttgtggacactacgatcacccatccaagaaattatgatttctac
atgtgtgctcatgcagggatgattggtacatctaagcctgttcattatcatgtgctactt
gatgagattggtttctcggctgatggcttacaagatttgatctattcgctgtcctatgtg
aaccaaaggagtacaattgcaacctcagttgtggcacccgtatcgtatgctcaccatgct
gcagctcagatgggacaattttttaattttgatgatttatcagaaacctctgattcagag
ggaaacatacccattccagagcttccaaggttgcataagaatgtcaggagttccatgttc
ttctgttga
DBGET
integrated database retrieval system
