Cajanus cajan (pigeon pea): 109789502
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Entry
109789502 CDS
T04868
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109789502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109789502
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109789502
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109789502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
109789502
NCBI-ProteinID:
XP_020204059
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MESEFSSEYQNMDFRRDSIVTRSVWACNVEYEFQLIGSVIGDYPFISMDTEFPGVVVRSD
PSLLRLPENNYATLKANVDRLDLIQVGLTFSDAEGNLPKFGSSNSFIWEFNFCNFDVTRH
LHAPDSIDLLRRQGIDFEKNRRFGIHTAHFAALMMRSGLACNNNIHWITFHGAYDFGYLL
KALTGRPLPQNLVQFLHVVKKFFGVRVYDVKHLLKFCPNLYGGLDRVCKSLNLDRMIGKS
HQAGSDSLLTLHAFLKIKDTYLQTQDQNSMLKYAGVMYGLEVP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagagttctcatcagagtatcagaacatggatttccgacgtgattcaatcgtt
acccgatcagtatgggcatgcaacgtggagtatgagtttcagttaatcggttcagtcatc
ggagactatcctttcatctctatggatacagagtttcccggcgttgttgttcgttccgac
ccttctcttcttcgcttgccggaaaataactacgccacactgaaagctaacgtagaccgt
ctggacctgatccaagttggtctcaccttttctgacgctgaaggcaacctcccgaaattt
ggatcctctaattccttcatctgggaattcaacttctgcaactttgacgtcacgcgtcat
cttcacgcgcctgattccatcgaccttctccgtcgtcaaggtatcgattttgaaaagaat
cgcagatttggaattcacactgcgcattttgctgcactcatgatgcgttctgggcttgcg
tgtaacaacaacattcactggattactttccatggcgcttatgattttgggtacttgttg
aaggcgctcactggccggcctttgcctcagaatttggttcagtttctgcatgtggtgaaa
aaattctttggagttagagtgtacgatgttaaacacttgttgaagttttgccctaatctt
tatggcggtttagaccgtgtttgcaagtctttgaaccttgatcgtatgattggaaagagt
catcaagctggatcggatagtttgctcactttacatgcttttctaaagattaaagatacc
tatctccagacacaagaccaaaatagcatgctcaagtatgcaggtgttatgtatggttta
gaggtgccttga
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