Cajanus cajan (pigeon pea): 109789657
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Entry
109789657 CDS
T04868
Name
(RefSeq) elongation factor 1-alpha isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109789657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109789657
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109789657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Mg_chelatase
PHD
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
109789657
NCBI-ProteinID:
XP_020204258
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MPRKVNYGLDYDDDYYDDEDYDDYEYDIDAEHHGGADTKQETVTPGLWQCSICTYDNDES
MTSCDICGVVRHPLLNIGTSNSSKTVEDISKSPGASKLARSLFQSLPQQIPKEVVLFPKL
GDGFLADGSNFYKLENVRGEFHEIHKAFSTQSHPHLNIDSFKFDVPSPDDVVYSGLHSSK
MGLKDKVTNSKSSQLSSSIREKNELSVQSNVESLENLSSLMRKSKQESSAVSKLSKNVAI
DLQISGKTLNSLPESLSKDKGNNINKINSSKNGTIDIQSSKEKSGSLSASTKIKESDKIS
LSSIKDGKPESNSSSFNNMVLDVRSGNSSSTNAKGSHSHVSFKPEKWMLPQQAEDTLTQL
NLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERE
RGITMTVAVAYFDTKRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMD
GNKGQTREHAQLIRSFGVDRVIVAINKMDAVEYSKDRFDFIRQQLGVFLHSCGFKASSVS
WIPMSAMENQNLVASPSDARFKNWYGGPYLLDAIDSLKPPTRDFSKPLLMPICDVIKSTM
LGQVSACGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDG
SHVMAGGVLCHPDFPVAIAKHLELKVLVLDGASPILMGAQLEFHIHHAKEPARVSRILSL
LDPKTGKITKKSPRCLTAKQSAVIEVILNESVCVVEFSTCKALGRVSLRSLGRTIAVGVV
TRIIEEQG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtgaactacggactcgattacgacgacgattactacgatgacgaagac
tatgacgattatgagtatgatatcgatgcagaacaccatggaggagctgatacaaagcaa
gagactgtaacacccgggctttggcaatgctccatttgcacttatgacaatgatgagagt
atgacttcgtgtgatatttgtggtgttgtacgtcatcccttgcttaacattggaacttcc
aacagtagcaaaacagttgaagacataagcaaaagtcctggagcatccaagttggccagg
tctctttttcaatcattaccacaacagattcccaaagaagttgtattatttccaaagctg
ggtgatggttttctggcagatggaagtaacttctacaagcttgagaatgtccgaggagaa
tttcatgaaattcataaggcttttagtactcaaagccatccacatttaaacatagattca
ttcaagttcgatgttccatccccagatgatgtggtttattctggtctacattcttccaaa
atgggtttgaaagacaaagttacaaactctaaaagttctcagctttcatcgagcatcaga
gagaagaatgaactgtctgtacaatcaaatgttgaaagtttagaaaacttatcatcctta
atgcgaaagagcaaacaggaaagttcagcagtgagcaagctttctaaaaatgtagcaatt
gatctacaaataagtggtaaaactttaaacagcttgccagaatctttgtcaaaagacaaa
ggcaacaatattaataaaataaattcttcgaagaatggtacaattgatattcaatcaagc
aaagaaaagtcaggtagcttgtctgcatcgacaaaaatcaaggaaagtgataagattagt
ttgtcttcaatcaaagatggaaaacctgaaagtaattccagcagtttcaacaatatggtt
cttgatgtaaggtctggaaattcaagtagtactaatgctaagggatcacattcacatgtt
tcttttaagccagaaaaatggatgctccctcaacaagctgaagatacattgactcagcta
aatcttgcaattgttggccatgttgattctggaaaatcaactctatctggtaggttacta
cacctattgggacgaatttcccagaaagaaatgcacaaatatgaaaaggaggccaagtta
cagggcaagggatcttttgcttatgcttgggcacttgatgaaagttctgaagaaagagaa
aggggaataactatgacagtggctgttgcttattttgacaccaagagatatcatgttgtt
gtgcttgactccccaggccataaagattttgtaccaaacatgatttctggggcaacacaa
gctgatgctgcaattcttgttatagatgcttcacttggttcatttgaagctggtatggat
ggcaacaaaggtcaaacaagggagcatgcacaacttatcagaagctttggtgttgaccgg
gttatagttgctataaataagatggatgctgttgagtactccaaagatcgatttgatttt
ataaggcagcagctgggagtttttcttcattcatgtggtttcaaagcctcttctgtatct
tggattcccatgagtgccatggaaaatcaaaatttggtggcatccccttccgatgctcgg
ttcaaaaactggtatggtggaccttatctgttagatgcaattgactctctcaaacctcct
acaagagatttctcaaaacctctactaatgccaatatgcgatgtcattaaatcaactatg
cttggacaggtgtctgcttgtggtaaactggaagcaggagctcttcggagtggatcaaag
gtcttagttatgccttcagctgttgtgggaacagtacgctcattggagcgtgattctaat
gcctgcactgttgcaagagctggagataatgtagctgtaacgttgcaaggtgttgatggg
agtcatgtgatggcgggaggtgtactctgccatcctgactttcctgttgcaattgctaag
catttggagttgaaagtgctagttttggatggtgcaagtcccatattgatgggtgctcag
ttagagtttcatatacaccatgcaaaggaacccgctagagtttcaagaatattgtcatta
cttgatcccaagactggtaagataaccaaaaagtcgcctcgctgtctcactgctaagcaa
agtgcagtaattgaggtgattttgaatgagtctgtttgtgtggtggagttctctacttgt
aaagctcttggaagggtgtccctaagatcattgggaagaacaattgctgttggagttgtg
acaagaataattgaagaacaaggttag
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