Cajanus cajan (pigeon pea): 109789721
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Entry
109789721 CDS
T04868
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109789721
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
109789721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
109789721
NCBI-ProteinID:
XP_020204341
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAEVISVPPDSLEKSPSSSAPPPPPPPPPSSAEDDLPPPPPPPQQHYPPRRRDRRDDRDF
DRPPNRRGDYYDRNASPPPPRDRDRDRDRDFKRRRSPSPPHRDRRYSPARRSPPPYKRSR
RGSPRGGYGPDDSRHGYDYYGGYERGTGGRGGYADEKSYGRFGPRSAGGYQNGISDVESN
RGYGDMSSGGSQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKD
EEWLKDKYHPTNLLTVIERRNENARQLAKDFLLDLQSGTLELNPGLNASISSKSEQASEP
NSEEDADTGGKRRRHGRGSNKENDFSAAPKAHPVSSEPRRIQADVQQAQALVCKLDSEKG
IEDNTLCNSDPNKNDDKAHSGSVGPIVIIRGLTSVKGLEGIELLDTLITYLWRIHGVDYY
GMIETNEAKGLRHVRPEGTRHEETGKSGSDWEKKLDLFWQGRLNGQDPLEVMTAKEKIDA
AAVEVLDPYVRKIRDERFGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMEQTSKVRE
DLYFQNYMNDTDSPGGTPIMQQPQRDRPLKRRLGLEGRLRDDRGNRRDHDRNDRLNGDRP
DNSPSHERKALEMGNHDETMYDSYAGPGVPPFASDIPPPPVLMPVPGAGPLGPFVPAPPE
VAMQMLRDQGGPSSYDASGRKMRSGPHMGGAAPIIAVPPNFRPDPRRMRSYQDLDAPEDE
VTVIDYRSL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagttatcagcgtgcctccagactccctcgaaaaatccccttcctcatccgct
cccccaccaccgccgccgcctcctccctccagcgccgaagacgacctcccgccgcctccg
ccgccgccgcagcagcattaccctccccggcgaagggacaggagagatgatagggatttc
gatcgccctcccaaccgccgcggcgattactacgaccggaacgcgtcgccaccgccgccg
agagaccgagacagggacagggatagggacttcaagcgccgccgcagcccgagccctccc
caccgtgaccggcggtattctccggcgcggcgctctcccccgccgtataagcggtcgcgc
cgggggagccctcgtggcgggtacggacctgatgatagcagacatggatatgattattat
ggtggttatgagcggggaacaggtggaagaggtggttatgcagatgagaagtcctatggc
aggtttgggcctcgttctgcaggggggtaccaaaatgggatttctgatgtagaatctaat
cgtggttatggagacatgtcaagtggtggttcacaaagagaggggttgatgtcctataaa
cagttcattcaggagcttgaggatgatatactaccagctgaagcagagcgtaggtatcaa
gaatacaaatcagagtacatctctactcaaaaacgagcttattttaatgctcataaggac
gaggagtggttgaaagataaatatcatccaacaaatttgcttacagtcattgaaaggagg
aatgaaaatgctcgacagctagcaaaggattttttgcttgatttacagagtggaacatta
gaactaaatcctggtttaaatgcctctatatccagtaaatcagagcaagctagtgagcca
aattccgaggaggatgcggacaccggaggtaaacgaagaaggcatggtaggggatccaat
aaagaaaatgatttctcagctgctccaaaggctcaccctgtcagttctgaaccaagacgg
atacaagcagatgttcaacaggcccaggcccttgtttgcaagcttgactcagaaaagggt
attgaagataatactttatgcaacagtgatcccaacaaaaatgatgataaggctcacagt
ggatctgtgggtcccatagtaattataagaggcctaacatctgttaagggtttagaaggt
attgagcttctggatacactcattacatatctttggcggattcatggtgtagattattat
ggcatgattgagactaatgaagcaaagggccttaggcacgtgagaccagaggggacaagg
catgaagaaacaggtaaatcagggtctgattgggaaaagaaacttgacttattctggcaa
ggaaggctgaatggtcaggatcccttggaagtaatgactgctaaggagaagatagatgct
gcagcagtagaagtattggatccatatgttagaaaaattagggatgaaaggtttggatgg
aagtatggttgtggagctaagggctgcacaaagctttttcatgctgctgaatttgtgcac
aaacatctgaagctcaaacacccagagcttgttatggaacagacttccaaagtacgagag
gatctctattttcaaaattacatgaatgatacagattctcctggtgggacgcccatcatg
cagcaacctcagagggacaggcctttaaaacgaagattaggtcttgagggccgattgaga
gatgatcgtggtaatcggcgagaccatgatcggaatgacagattaaatggagataggcct
gataattccccatctcatgaaaggaaggcacttgagatgggaaaccatgatgaaacaatg
tatgattcatatgctggaccaggtgtacctccatttgcctcagatatacctcctccacca
gtgttgatgcctgtccctggtgctgggcctttgggaccttttgttcctgctcccccagaa
gttgcgatgcagatgctaagagatcaaggaggaccatcatcatatgatgcctcaggaaga
aagatgcgatctggccctcatatgggtggagctgcaccaataattgctgttcctccaaat
tttagaccagatcctcggaggatgcgaagttaccaagatctggatgccccagaggacgag
gtcactgtgatagactatcggagtttatag
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