Cajanus cajan (pigeon pea): 109789802
Help
Entry
109789802 CDS
T04868
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109789802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109789802
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109789802
mRNA cycle factors
Common to processing body (P body) and stress granule
109789802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
109789802
NCBI-ProteinID:
XP_020204423
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MMIVEMDKMSAPSSRERAQRLYEKNLELENKRRRSAQARVPSDPNAWQQMRENYEAIILE
DQAFSEQHNIEYALWQLHYKRIEEFRAYFSAALSSTSANSSQGAKGPARPDRIAKIRLQF
KTFLSEATGFYHDLITKIRAKFGLPLGYFDDSENRIVMEKDGKKSSEMKKGLVACHRCLI
YLGDLARYKGMYGEGDSINREFTAASSYYLQAASLWPSSGNPHHQLALLASYSGDELVAI
YRYFRSLAVDSPFTTARENLIVAFEKNRQSFSQLSGDAKALAVKESSGRSTGKGRGKGEA
KLATRGTSVDASPKPGASSTKETYKYFCTRFVRLNGILFTRTSLETFAEVLAVVSTGLRE
LLSSGQDEELNFGTDTAENALVIVRIVCILVFTVYNVNKESEGQTYAEIVQRAVLLQNAF
SAAFELMGYIIERCAQLQDPSSSYLLPGILVFVEWLACYPDLAAGNDVDENQATLRSEFW
NHCVSLLNKLFSVGPMSIDDDEEETCFNNMSRYEEGETENRLALWEDSELRGFVPLHPAQ
TILDFSRKHSIGNDGDKERKARVKRILAAGKALATVVKVDKKMIYFDSKAKKFLIGVEPQ
TSDDFVLATYSSMPNANGLVHENLADKLKMDTVQSNQYQNMEGDDDDEVIVFKPLVSETR
ADVVASSWAPHVGLEPVPKASGGDFNFHVNSTSNPLINPSHQTSSVPGSGMVPQHMQPVQ
PHTSRWLDEEISLANNLKGLGLFENGQVMKPGLQEAVGFSSHVSLPIPIQQSIGADTNGM
FYGLSKALESVVPSKVDAIASSGVLTDNLAVKTSVLPVGLRKTPVSRPTRHLGPPPGFSP
VPLKLGIESTVSDSISGNPIMDDYSWLDGYHLRTSTKGLGSNGPPLNYTHSNTQQVVSNG
FSPTVSFPFPGKQVPSVPPQVEKQNGWQDYQTYDLLKSHNDQQLQPQQLTTGNQQFSPMP
EQFQGQSIWTGRYFV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagtagaaatggataagatgtctgctccttcatcaagggagcgtgcacaacgc
ctctatgaaaagaatcttgaattggagaataagcgtcggaggtcagctcaggcgcgggtc
ccatcagatccaaatgcctggcaacagatgcgtgagaattatgaagcaataattcttgag
gatcaggctttttctgagcagcacaatattgaatatgctctttggcagttgcattacaag
aggattgaggagtttagggcatacttcagtgctgctctttcttctacaagtgcaaactca
tctcagggagctaaaggccctgcacgacctgatcggatagctaaaataaggctacagttt
aagacttttctttcagaagcaactggattttaccatgatcttattacaaaaatcagagcc
aagtttggtcttcctcttggttactttgatgattcagagaatcgaattgtgatggagaaa
gatggaaagaaatcttctgagatgaagaaaggtttagtagcttgtcatcgttgtctgata
tacttgggtgatcttgctcgttataagggaatgtatggtgaaggtgactcaattaaccgg
gagttcacagcagcttctagttactacttgcaagctgcatctctttggccttctagtggc
aatcctcatcatcagcttgctttgctggcctcatattctggggatgagctggtggctatt
tatcgatattttcggagtctggctgtggatagcccatttacaactgcaagggaaaacttg
atagttgcatttgagaagaatcgtcaaagtttctctcagctttctggtgatgctaaagct
cttgcagtcaaggaatcttctggacgatcaactggaaaaggaagaggaaaaggggaagca
aaacttgcaacaaggggtaccagtgttgatgccagtcctaaaccaggagcatccagtaca
aaagaaacttataaatacttctgcactcgctttgtccgtctaaatggaatcttgtttaca
cgcacaagccttgagacctttgctgaagttcttgctgttgtaagcactggcctgcgtgag
cttctgtcttctgggcaagatgaagagctgaattttgggacagatactgctgagaatgcg
cttgtcatcgtcagaattgtctgcattctagtatttacagtttataatgtgaacaaggaa
tctgaaggccaaacttatgcagaaattgtacagcgtgctgttctgcttcaaaatgcattt
agtgcagcttttgaattgatgggttacataatagagagatgtgcacagctgcaagatcct
tcttctagttatcttttaccaggcattttggtttttgttgagtggttggcttgttatcca
gatcttgctgcaggcaatgatgtggatgaaaatcaggcaactttgagatctgaattttgg
aaccattgtgtgtccttattgaataagctgttttcagttgggcctatgtctattgatgat
gatgaagaggagacttgctttaataacatgagcaggtatgaggaaggggagactgaaaat
cgacttgctttgtgggaggactctgagttaaggggatttgttccacttcatcctgcacaa
accatcttggatttctcaaggaagcattccattggaaatgatggtgacaaggaaagaaaa
gctcgggtcaaaaggattttagctgcagggaaggctttagcaactgttgtaaaggttgat
aaaaaaatgatatattttgattcaaaggcgaagaaatttttaattggtgttgagcctcaa
acctcagatgattttgttcttgccacttattcaagcatgccaaatgcaaatgggttggtg
cacgaaaatctggcagacaaattaaagatggacactgttcagtcaaaccaataccagaat
atggaaggagatgatgatgacgaggttattgttttcaagcctttagtgtctgagacacga
gctgatgtggttgcctcatcatgggcaccccatgtcggtttggagcctgttccaaaggca
tctggaggggatttcaattttcacgttaattctacttccaaccctcttattaatccaagt
catcaaacttcatctgtgcctggtagtggtatggtgcctcaacacatgcaaccagttcag
ccacatacatcacggtggttagatgaggaaatatctcttgctaacaatttaaaaggtctt
gggctatttgagaatgggcaggtgatgaaacctggcttacaagaagctgttggcttctct
agtcatgtttcacttcctattcctatccaacaatctataggtgctgatactaatggcatg
ttttatggtctctcaaaagctttggagtctgtggtaccatccaaagttgatgctattgca
tcttctggagtacttactgataatttagctgtaaaaacatcagttttgccagttggttta
agaaaaaccccagttagtcgacctactaggcaccttggacctcctcctggtttcagtcct
gttcctctgaaactaggtattgaatccactgtttcagattcaattagtgggaatccaatt
atggatgattacagttggttggatggatatcatttgcgtacatcaacaaaaggattaggc
tccaatggtcctcctcttaactacactcattcaaatactcagcaagtcgttagcaatggt
tttagtcctactgtcagctttccttttcctggaaaacaagttccatctgtgcctcctcaa
gtggagaaacagaatggttggcaagattatcaaacttatgatcttttaaaatcacataat
gatcagcaactgcagccacaacagctcacaactggaaatcaacagttctctcctatgcct
gagcaatttcaaggacagtcaatctggacaggtcgttactttgtgtga
DBGET
integrated database retrieval system