Cajanus cajan (pigeon pea): 109789854
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Entry
109789854 CDS
T04868
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109789854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109789854
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109789854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
F-box-like
LRR_4
F-box
LRR_At5g56370
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
109789854
NCBI-ProteinID:
XP_020204478
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MVGKDNNLRAEDLNLCFEKLMMVAASGNSEKGMNMMKLGVITEWKDIPVELLMQILSLVD
DQTVITASGVCRGWRDAIYFGLARLSLSWCSKNMNNLVLSLVPKFAKLQILILRQDKPQL
EDNAVEIIAKCCHELQILDLSKSFKLTDRSLYAVALGCRDLSKLNISGCSAFSDNALAYL
ASFCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNLGWCDNVGDVGVTTLAYGCPDL
RTVDLCGCVRITDDSVIALANRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRMWGSVKG
ENDEEGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVH
AHRAFTSFTHPAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaaggataataacctgagggctgaggacttgaacttgtgctttgagaaactt
atgatggtggctgcgagcgggaacagtgagaaagggatgaacatgatgaagcttggggtg
atcaccgagtggaaggatattcctgtggagcttttgatgcaaattttgtcccttgtggat
gatcagaccgtgatcacagcttctggagtatgtcgtggctggagagatgctatttacttt
ggccttgctcgtttatcactctcatggtgtagcaagaacatgaataacttggtgctttct
cttgtgcctaaattcgcaaaactgcaaattctaatccttcgtcaagacaagcctcaacta
gaggataatgctgttgagattatagcaaaatgttgtcatgaactgcagatcctggacctt
agcaaaagcttcaagctaactgatcgttcactctatgctgttgctctaggttgccgtgat
ctttcaaaactcaacatcagtgggtgttcagcatttagtgacaatgctctggcttatctt
gccagtttctgcagaaaactgaaagttctaaatctctgtggatgtgttagagctgcatct
gatactgcattacaggctattggacaatactgcaaccagttgcaatctttgaaccttgga
tggtgtgataacgttggtgatgttggagtgactactttagcatacgggtgtcctgatctt
aggacagttgacttgtgtgggtgtgtccgtattacagatgatagtgtgattgctttggca
aacagatgcccccatctgaggtcccttggactgtactactgcaagaacatcacagacagg
gcaatgtattcgttggcacacagcaaggtgaataacaggatgtggggatctgtgaaagga
gaaaatgatgaggaaggtttaaggactttgaacataagccaatgcactgcactcacccca
tctgcagttcaagcggtttgtgactcattcccttctcttcacacatgctcggggaggcat
tcactcatcatgagtggctgcctcaatttgacatctgtgcattgtgcatgtgctgtccat
gcacaccgtgcattcacctctttcactcatcctgctcactaa
DBGET
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