Cajanus cajan (pigeon pea): 109789947
Help
Entry
109789947 CDS
T04868
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109789947
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109789947
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109789947
Membrane trafficking [BR:
ccaj04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
109789947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Motif
Other DBs
NCBI-GeneID:
109789947
NCBI-ProteinID:
XP_020204597
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MDSPHSQQTWGRSPTTTSSSSLSKSNSNSNSDTIQSLSSILNNPHASDAASWVGWWSSST
AVAPPEFAPIAAAKAASEVSRSDFLPYLAPIADAYHRFEDIRNHASREINDVAKAAAADG
GAGGGGGLGEALVACLREVPSLYFKEDFRLEDGATFRAACPFANVAENLALQEKLSHYLD
VVELHLVKEISLRSSSFFEAQGQLQDLDDKILQGCTQIRHLKDTIRLLDADLVHDARQIQ
ELNGTRTNLLALLQKLRLILYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGL
HCFRHLRDHVIGFIDSINSILSAEFIRASLHDAAEKDSIILSKAKARASLPMNGKDDEVM
LEEEETNIFKDSLLPTVIGLLRTAKLPTVLRTYRDTLTADMKSAIKTAVAELLPVLASRG
SESEFFSGDRAVDADGGGASLASKLRSLSSDCFVHLLSAIFLIVQAHLVRAAEVKKAIEW
ILNNHDGHYAADSVVAAIAHGAVAAETSQESEAHGTTFLPYSSQRSVAKGSSFQGKAIDA
VSSSNMSKNFRADILRENAEAVFAACDAAHGRWAKLLGVRAILHPRLKLQEFLTIYNITH
EFITATEKIGGRLGYSIRGTLQSQAKAFIDFQHESRMSKIKAVLDQETWVEIDVPDEFQS
IINMLFTSEALTSENLNGTEDDISTGYNGVVTNNDVMPTADSAQSNAEQQITRTNSIEAS
MNSEASDSSKPLVDSIEPNKAHGRISSAHSNNLEKDHKKSASQALYYKGVSYHMVNCGLI
LLKMLSEYIDMNNLVPTLSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVLLVLFSRLWYN
LDICAYIHVQIDTQTIYLEQGLF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggattccccacattcgcagcaaacgtggggaaggtcacccaccaccacctcctcctcc
tctctctccaaatccaattccaattcaaattccgacaccatccaaagcctctcctcgatc
ctcaacaacccccacgcctccgacgccgcctcctgggtcggctggtggtcctcctccacc
gccgtcgcgccgcccgaattcgcccccatagccgccgccaaggccgcctccgaggtctcc
cgatccgacttcctcccctacctcgcccccatcgccgacgcctaccaccgcttcgaggac
atccgcaaccacgcctccagggagatcaacgacgtcgccaaggccgcagccgccgatggc
ggcgccggcggcggtggcggtctcggcgaggcgctggtcgcgtgcctccgcgaggtcccg
tcgctctacttcaaggaggacttccggctggaggacggcgccacgttccgcgccgcgtgc
ccgttcgccaacgtcgccgagaacctcgcgctgcaggagaagctgtcgcactacctcgat
gtggtggagctccacctcgtgaaggagatctcgctccgctcctcctcgttcttcgaggcg
cagggccagctgcaggaccttgatgataagatccttcaaggttgcacgcaaattcggcac
ctcaaggacaccattcgcctcctcgacgccgatttggtccacgacgcgcgccagattcag
gagcttaacggcaccaggactaacctcttggcgctcctgcagaaactcaggcttatatta
tacgtcaaccaggccctctctgctctcaaattgcttgttgcgtctgcagattgtgctgga
gcgttggatgtgactgatgatttgcaacatttgctggatggagatgaactcactggtcta
cattgctttcggcatcttagagatcatgtaataggctttatagattccataaacagcatt
ctctcggctgagtttattcgagcttcgttacacgatgctgcagaaaaagatagtataatt
ttatccaaagctaaagcaagagcttcccttccaatgaacggaaaggatgatgaagtaatg
ttggaagaagaagaaaccaatattttcaaagatagtcttcttcctactgtaattggattg
cttagaactgctaaacttcccactgttctgaggacttatcgagatacgctgactgctgat
atgaagagtgctattaagactgctgttgctgagttgcttccagttcttgcttctcgaggt
tctgagtcagagttcttttctggagacagggctgtcgatgcagatggtggaggtgcatca
cttgctagcaagttgaggagcctatcatctgattgctttgtgcatcttctgagcgctatt
ttcttgatagtacaggcacatttagtgcgggctgctgaagtgaaaaaggccattgaatgg
attttgaacaaccatgatggccattatgctgctgattcagttgtggcagcaattgctcat
ggtgctgttgctgcagaaacatcccaggaaagcgaggctcatggtactacatttttacca
tattcatcacaaagaagtgttgccaagggttcttcatttcagggaaaagcaattgatgct
gtgagctcctcaaacatgtcaaaaaatttcagagctgatatattgcgagaaaacgcagaa
gctgtctttgcagcatgcgatgctgctcatggaagatgggcaaaacttcttggtgtccgt
gcaattctccatcctaggttgaaattgcaggagtttctaaccatatacaatatcacccac
gagttcattactgcaacagaaaaaataggtgggagattgggatacagcatccgtggcacg
ctgcaatcacaggccaaggcttttattgattttcagcatgaatcacggatgtcaaagata
aaggcagtgcttgaccaggaaacttgggtggagatagatgttcctgatgaatttcaatcc
atcattaatatgctttttacatctgaagcattgacttctgagaaccttaatggcactgag
gatgatatttcaactggttacaatggtgtcgtgactaacaatgatgttatgccaacggca
gatagtgcacagtcaaatgctgaacagcaaattactcggacaaattccattgaagcatct
atgaatagtgaagcatccgatagttccaaacccctggtcgattcaatagaaccaaataaa
gctcatggtaggatttcatcagcacacagtaacaatctcgagaaagaccataaaaaatct
gcatctcaggctctttattacaaaggtgttagttatcacatggtaaactgtggcttaata
ttgctcaagatgttgtcggagtacattgatatgaacaaccttgtgcccacactatcttca
gaagttgttcaccgtgtggtagaaatcttgaagtttttcaacacaagaacatgccaactt
gtgcttggagctggtgctatgcaggtactgctagtattgttttcaagactgtggtacaat
ttagacatatgcgcatatatacatgttcaaattgacactcaaactatatatttggagcaa
ggtcttttttag
DBGET
integrated database retrieval system
