Cajanus cajan (pigeon pea): 109790033
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Entry
109790033 CDS
T04868
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109790033
Enzymes [BR:
ccaj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109790033
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Other ribosome biogenesis factors
109790033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Methyltransf_31
FtsJ
PCMT
Ubie_methyltran
Methyltransf_4
RrnaAD
Motif
Other DBs
NCBI-GeneID:
109790033
NCBI-ProteinID:
XP_020204710
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MKKAKKSGEDNGGKLRGAERSAYFARRETAKVLRVVLEGDAKRRALASIKSLVYQPSIRN
KKATFALLCQTLKHLPIIKDVLQAASILNTKWKRQPELIYIIVYDILFGQAVSLVGDAEK
FLMRHQDALRSTLKQLLLQRNVKTVKQLIDLHHGPDVSVPRYVRVNTLKLDVDSAFLELK
KQYSVQKDNLLPDLLILPPGTDLHDHPLVKNGSIFMQGKASSMAAPALSPEPGWEVLDAC
AAPGNKTVHLAALMKSKGKIIACELQKERIRRLKDTIKLSGASNIQVLNGDFLSINPEDP
SYSKVKAILLDPSCSGSGTAASRLDHLLPSKAEGMDTDMGRLNKLATFQRKALQHALLFP
AVERIVYSTCSINQIENEDVIKSVVPIAESYGFQLAKPFPEWECRGLPVFEGSECLVRTD
PATHGEGFFIALFARKDAYLWSNKKETRISHSPSKIKNARRKKKTIPFVSTNPFRMWLYD
QLNYRSGRNCR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcgaagaagagtggcgaagataatgggggaaaattgaggggcgcggagagg
tcagcgtacttcgcacggcgagagacagcgaaggtgttgagagtggttctggagggagac
gccaagcgccgcgcccttgcctccatcaaatccctcgtctatcaaccttccattcgaaac
aagaaggccaccttcgctctcctctgtcaaaccctcaaacatcttcccatcatcaaggat
gtcctccaagctgcttccattctcaacaccaagtggaagaggcagccagaattgatttat
atcattgtctatgatatccttttcggccaggcggtttcacttgttggtgatgcagagaag
ttccttatgcgccaccaagatgccctgcgttcaactctcaaacagcttttgttgcagaga
aatgtcaagacagttaaacagttgattgatctgcatcatggtcctgatgtttctgtacct
cgatatgttcgtgtcaatacacttaaactggatgttgattctgcctttcttgaacttaag
aaacaatactcggttcaaaaggataatttactgcctgacttgctgatactccctccaggc
actgatttgcatgatcatcctcttgtcaagaatggaagtatctttatgcaaggtaaggca
agttctatggcagcaccagcccttagccctgaaccaggatgggaggttcttgatgcatgt
gcagcaccgggaaacaaaactgttcaccttgctgcccttatgaagagtaagggtaagatt
atagcatgtgagctgcaaaaggaaaggattaggcgtttgaaagacactataaagctatct
ggtgcttctaacattcaagtcctcaatggggatttcttgagcataaatcccgaggatcct
tcatattctaaggtaaaagctattctcttggatccttcctgctctggttctggtactgct
gcttcaagactggaccatctactcccatctaaagcagaaggtatggatacggatatggga
agattgaacaagcttgcaactttccagagaaaggctcttcagcatgctttactttttcca
gctgttgaaagaattgtatacagtacatgttcaatcaaccagattgagaatgaagatgtc
atcaaatctgttgtgcctatagccgaatcatatggatttcaactggcaaagcccttcccc
gagtgggaatgccgtggtcttccagtgtttgaaggctctgaatgcttggttcggacagat
cctgctacgcatggcgagggtttcttcattgctttgtttgctaggaaagatgcttacttg
tggtcgaacaaaaaagaaactagaatttcccacagcccttccaaaattaaaaacgcacga
agaaagaagaaaactataccgttcgttagcaccaacccgttcagaatgtggctatatgat
caactgaattatcgtagcggtcgaaattgtaggtag
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