Cajanus cajan (pigeon pea): 109790158
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Entry
109790158 CDS
T04868
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X2
KO
K14408
cleavage stimulation factor subunit 3
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109790158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109790158
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109790158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_15
TPR_19
TPR_CcmH_CycH
TPR_16
ANAPC16
TPR_2
TPR_11
Motif
Other DBs
NCBI-GeneID:
109790158
NCBI-ProteinID:
XP_020204862
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MYMYHYPDIWYDYATWHAKGGSIDAAIKVFQRALKALPDSEMLRYAYAELEESRGAIQAA
KKIYESLLGDGVSATALSHIQFMRFLRRTEGVEAARKYFLDARKSPSCTYHVYVAYAMMA
FCLDKDPKMAHNVFEAGLKRFMHESVYILEYADFLTRLNDDQNIRALFERALSSLPPDES
VEVWKKFTQFEQTYGDLASMLKVEQRRKEALSGGEDGTAVLESSLQDIVSRYSFMDLWPC
SSNDLDHLSRQEWLAKNFNKKVEKAISLNGVTLLDKTSMASISTTTTKIVYPDTSKMVIY
DPKHTPGSGTNAFDEILKATPPALVAFLANLPAVEGPMPNVDIVLSICLQSDLPTGQSGK
TGIPTQVQSGKAGIPAQLPAGPAPATSELSGSSKSHPVQSGVSMKPTSNRQYGKRRDLDR
QEDDDTTTVQSQPLPRDAFRIRQYQKARASSASQTGSVSYGSAFSGDLSGSTGC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgtaccattatcctgatatatggtatgactatgctacatggcatgcaaaaggt
ggttcgatagatgctgcaatcaaagtatttcaaagggctctgaaggctctccctgattca
gaaatgctacgatatgcatatgcagagctagaggagtcccgtggagcaattcaggctgca
aagaaaatatatgaaagccttctgggagatggtgtcagtgcaacagcactttctcatatt
caattcatgcgttttttaagaagaactgaaggtgttgaagctgctaggaagtacttttta
gatgctcgcaaatctccaagctgtacatatcatgtttatgttgcttatgctatgatggca
ttttgtctcgacaaggatcccaagatggctcataatgtttttgaagcagggctaaaacgc
tttatgcatgagtctgtttatattctcgaatatgctgatttcttgactcgtttgaatgat
gaccaaaatatacgtgcattatttgagagggcattaagttcacttccacctgacgaatca
gttgaggtctggaaaaagttcacccagtttgagcaaacttatggggatcttgctagcatg
ctcaaggttgagcaacgaaggaaagaagcactttctggaggggaagatggtacggcagta
ttagagagttctctgcaagacattgtatcacggtacagttttatggatctgtggccgtgc
tcctctaatgatcttgatcatttatctcgacaagagtggcttgccaaaaatttcaataag
aaagtggagaaggctatttcgcttaatggggtgactcttttagataagacatctatggca
agcatttcaactacgacaacaaaaattgtttatcctgatacttcaaagatggtgatatat
gatccaaaacatactcctggttctggaacaaatgcatttgatgaaattcttaaagctaca
ccacctgctttggtcgcatttttggcaaatctacctgcagttgaaggtccaatgccaaac
gtggatatcgtgctatcaatttgtttgcagagtgatttaccaacaggacaaagtgggaaa
acagggattccaacacaagtacaaagtggtaaagcagggattccggcacagttgccagca
ggtcctgctcctgctacaagtgaactttctggttcaagcaagtctcaccctgttcaaagt
ggcgtatctatgaaaccaaccagtaatagacaatatgggaaaaggagggatttagatagg
caagaggatgatgatactacaactgtccaaagtcaaccacttccccgagatgctttccgg
atacgtcagtatcagaaggctcgagccagcagtgcttcacaaacaggatcagtttcatat
ggaagcgcattttccggcgatttatctggaagcactggttgttaa
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