Cajanus cajan (pigeon pea): 109790458
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Entry
109790458 CDS
T04868
Name
(RefSeq) nuclear pore complex protein NUP62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109790458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109790458
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109790458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
ATG17_like
FapA
DUF6306
DUF1281
AAA_23
Motif
Other DBs
NCBI-GeneID:
109790458
NCBI-ProteinID:
XP_020205202
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MSGFSFGSSSSSSTPSFSFTNPSSSSSSSSPFSFTSSPSLFTTTTNPTSAAASSPSPLNF
SFAPSSSSSAASATAPSIFAAATSASPLFGAASSSETTPFGAASPATTPFGAGSSSPFGG
TSSVSTNLFGGTSSASGTLFSGTPSASTRPFGAMSSASVTLFGGNSSASTTPFGAASSTS
TSTTPFGGASPASALFGGTSSSFGGTASATTPFGGSSTPSASTPAFGASSSAASLFGGGS
SSAATTPFAALAASSGASSSPLFSGAFATTGASSSSASTTSFSAFAKPSAPTTTTTSSSS
SGFSFGTPASSASQPSFGFPNVASGSASASSSAASAASTAPASKAPGSFSFTTSSAPLFS
TVTTTTASTVGTGSTTLSPSVPAFGASAASSAAAAAASASAAPAASSSSGGSSFTGFGVG
STSSTASFGTGFAFANKSSTPAVSSVTTSAFGVSTSSSTAPAILSSSTGATQTSTAVVVA
STSGTTSSVSTTVAAAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI
LHNRDVLLRLEIEVAKVVETQSNLERQLELIETHQQEVDKALQSMEEEAERIYKDERGLL
LDDEAASTRDAMYEQSELIERELEQMTEQIKSIIQSLNSNQGGELDTLDGMTPLDAVVRI
LNNQLTSLMWIDEKAEEFSSRIQKLANPGSASASDREMTGPGFWMF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttctccttcggatcctcttcctcttcttccacaccttccttttccttcaca
aacccatcctcttcctcctcctcttcttccccattctcattcacatcctccccctccctc
ttcaccaccaccacaaaccctacctccgccgcggcctcttcgccctccccgttaaatttc
tcctttgctccctcttcttcctcctccgccgcgtccgccaccgctccttcaattttcgcc
gctgccacttccgcctctcccttgttcggcgctgcttcctcctccgaaacgacgccgttt
ggtgcagcctcccctgcgacgacgccgtttggagcaggttcatcctcgccattcggtgga
acgtcttcagtttcaacgaatctgtttggaggtacctcctcagcttcagggactctattt
agtggaacgccctcggcttcgacgaggccgtttggcgcaatgtcctccgcatcagtaacg
ctgtttggtggaaactcatctgcttcaacgacgccgtttggtgcagcgtcttcaacttca
acttcgacgacgccgtttggtggggcgtcccctgcgtcggcgctgttcggagggacgtct
tcttcgtttggtggaacagcttctgcaacgacgccgtttggaggtagtagtaccccctct
gcctcaacgccagcttttggggcatcttcttctgccgcatcgttgttcggaggaggatca
tcctcagctgcaacgacgccgtttgcagcgttggcggcttcttcaggtgcaagtagctct
cctttgttctcaggtgcatttgccacaactggagcttcttcgtcctcggcctcaacgacg
tcgttttcagcgtttgcaaagccatctgctccaaccactacaacgacgtcgtctagctcg
tcgggattctccttcggaacccctgcttcctctgcttctcaaccctcttttgggttcccc
aatgtagcttcgggttcggcttcagcttcttcttcagctgcttccgcggcttctaccgca
ccggcgtccaaggcaccgggttcgttttcgttcaccacgtcttcggcgccgctgttctca
acggtgacaaccaccactgcttcaaccgtgggcaccgggagcacgaccttgtcgccgtct
gtgcctgcctttggtgcttccgcggcttcttctgctgctgctgctgctgcgagtgcctcc
gcggctcctgctgcatcttcttccagtggaggatcatcttttacaggatttggcgtggga
agcacgtcgtccactgcttcttttgggactgggtttgcctttgcgaataagtcatcaacg
ccggcagtttctagtgttactacttctgcatttggggtgagcacgtcatcctctactgct
ccagcaattttgagttccagtactggtgctactcagacatcaactgctgttgttgtggct
tccactagtggaactacttcaagtgtcagcactacagttgctgctgcaccaaaattgcca
tctgaaatcacaggaaagactgtggaggagattatcaaggagtggaatgctgagctgcaa
gagcgaactggaaaatttagaaaacaagcaaatgcaatagctgaatgggatcgcaggatt
ttgcacaatcgagatgttttattgaggcttgagattgaagtggcaaaagttgttgagaca
caatcaaatttggagaggcaattggagttgatagagactcatcaacaggaggttgataag
gcattacagagtatggaggaagaagctgaacgaatttacaaggatgagcgtggattactt
cttgatgatgaagctgcatctacaagagatgcgatgtatgagcaatctgaattgattgaa
agggaacttgagcagatgacagaacaaatcaaatcaattatccaatcccttaattcaaac
cagggtggagaacttgatactcttgatggaatgactccattagatgcagtggttcgaatt
ttaaataatcaactaacttctctgatgtggattgatgaaaaggctgaagaattttcttcc
cgcattcagaagctagctaacccaggttctgcatctgcttcagatcgtgagatgacgggt
ccaggattctggatgttctga
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