Cajanus cajan (pigeon pea): 109790484
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Entry
109790484 CDS
T04868
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109790484
04121 Ubiquitin system [BR:
ccaj04121
]
109790484
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109790484
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
109790484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
RNA_bind
R3H
NCBP3
TT1_Tal
Motif
Other DBs
NCBI-GeneID:
109790484
NCBI-ProteinID:
XP_020205230
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MSSQLRRERRDGSRVPSQGATRQEWVPRRSAASTTSVQPSNLHSNNNADAGSSNQGVPVA
PVTLHRSNHGTHRVESNHGSHRVESNHGPHRAERERERDKGRRSGNQVGRGLSLGVRDSS
LPQLVQEIQEKLLKSTVECMICCEMVKRSAPVWSCSSCYAIFHLNCIKIWARAPISGDFS
VEKNQGINWRCPGCQFVQLTSSKEIRYVCFCGKRTNPPSDLYLTPHSCGEPCGKPLEREV
LVAGSNKDDLCPHSCVLQCHPGPCPPCKAFAPPRLCPCGKKTIATRCSDRRSVLTCGQCC
GKLLECERHPCERICHIGPCDPCQVSINASCFCTKTTEVIPCGQMAVKGEIEAKGGVFSC
GSYCLKKRSCGNHVCSEYCHPGSCGECELLPSRVKTCCCGKTRLENERKSCLDPVPTCSQ
VCGKLLHCSTHRCKEPCHAGLCPPCMVLVSQKCRCGSTIRTVECYRTTMMNEKFMCEKSC
GRKKNCGRHRCSEKCCPLSNPNNNLSGDWDPHFCSMACEKKLRCGQHVCESLCHSGHCPP
CLETIFTELTCACGRTSILPPLPCGTPPPSCQLPCSVPQPCGHSGSHSCHFGDCPPCSVP
VAKHCIGGHVVLRNIPCGSKDIRCNHLCGKTRQCGLHACGRTCHPPPCDNVSGVVQGFKA
PCGQTCGAPRRCCRHMCMAPCHPSSPCPDIKCEFPVTITCSCGRITANVPCDAGGSSNNY
NADAIHEASIIQTLPVPLQPVDANGKKVPLGQRKLMCDDECAKLERKRVLADAFDITPPS
LDSLHFGENSLSSESLSDIFRRDPKWVLAVEERCKVLVLGKSRGITHGLKVHIFCPMPKE
NRDAVRSIAERWKLAINAGGWDPKRFIVISVTPKSKAPARVIGVKGTPTLSAPLPPVFDP
TVDMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLD
HGTVYQGAVLVAPNVASSATNAWGGAGAAKGGAALASTSASRGNSWKKAVVQDSDWKEDS
WGDEGLATGSVQPSVWKKEAPIAASLNRWNVLEHESGSGSSSSSLTTVRAEVSGKQVENS
AVSTFVSGAGGSNGEGNSDAAEVSEVVDDWENAYE
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaacttcgaagagaaagaagggacgggtccagggttccatcacaaggtgct
actcgtcaagaatgggtccccagaaggagtgctgcatccaccacttctgttcagccctca
aatttgcactcgaataacaatgctgatgctggttcttccaatcaaggggtccccgttgct
ccggtcactctccatagaagcaatcatgggactcatagggtggaaagcaatcatgggagt
catagggtggaaagcaatcatggacctcatagggcggaaagggaaagggaaagagataaa
ggaaggaggagtgggaatcaggtggggaggggattgagtttgggagtcagagactctagt
ttgcctcaattggtgcaggagattcaggagaagctcttgaaaagtactgtggagtgcatg
atatgctgtgaaatggtaaagaggtctgcgcctgtttggtcttgctccagctgctatgct
atctttcatctgaattgcatcaagatttgggccagggcacccatctcgggtgatttttct
gtggagaagaatcaagggattaattggcggtgtcctggttgtcagtttgtgcagctcacc
tcttctaaggagattcggtatgtttgcttttgtgggaagaggacaaaccctccttctgat
ttgtatctgacaccacattcatgtggagaaccatgtgggaagcctcttgagagggaggtg
ttggttgctggaagtaataaggatgacctttgccctcattcttgtgtcttgcaatgccat
ccagggccatgccctccttgtaaagcatttgctcccccacggttgtgcccttgtgggaag
aaaactattgccacccgctgctctgataggaggtctgttcttacctgtggacagtgctgt
ggtaagcttcttgaatgtgagcgccatccctgtgaacgcatttgtcacattggtccctgc
gatccttgtcaagtttcgatcaatgcctcatgcttttgtactaaaacgacggaggttatt
ccttgtgggcagatggctgtgaagggtgaaattgaagcaaaaggtggggttttttcttgt
ggttcctattgtctaaagaaacgtagttgtggtaatcatgtctgtagcgagtattgtcat
ccaggcagctgtggggaatgtgagcttttaccaagccgggttaagacatgctgttgtggg
aaaacaaggttggagaatgaacggaagagttgtttggatccggtacctacctgctcacaa
gtatgtggcaagctccttcattgtagcacgcatcgttgtaaagagccatgtcatgctggg
ttgtgtccaccttgtatggttctagtttcacagaaatgccgttgtggctcaactatccga
actgtggagtgctataggactacaatgatgaatgagaaattcatgtgtgaaaagtcttgt
gggagaaaaaagaactgcggaaggcatcgatgtagtgaaaagtgttgtccactttctaat
ccaaataataatttgagtggggattgggatcctcacttttgttccatggcatgcgaaaag
aagctaaggtgcggccagcatgtgtgtgaatctctgtgtcacagtggtcactgtccacct
tgtctcgaaacaatctttactgaattgacttgtgcttgtggtaggacatcaatccttcct
cctctaccttgtggtacaccacctccttcatgtcagcttccgtgctcagttcctcagccg
tgtggccattcaggctcacacagttgccattttggagactgccctccttgttcagtgcct
gtagcaaaacactgtattggcgggcatgtagttcttaggaacataccttgtggttcaaag
gatatcagatgcaatcatctctgtggcaagaccaggcagtgtggtttacatgcatgtggc
agaacgtgtcaccccccaccttgtgataatgtatctggtgttgtgcaaggtttcaaagcg
ccatgtggccaaacatgtggtgctccaaggagatgctgccggcacatgtgtatggctcct
tgtcacccttcatctccgtgcccagatataaaatgtgaattccctgttactatcacttgc
tcttgtggccgtataacagcaaatgttccttgtgatgctggtggtagcagtaacaattat
aatgctgatgccatacatgaagcttccattattcaaacgttgcctgtaccacttcaacca
gtggatgcaaatggcaagaaagttccccttggacaaagaaagctgatgtgtgatgatgaa
tgtgccaagttggaacgcaaaagggttcttgcggatgcttttgacattactcctccaagt
ctggattcactccattttggtgagaactctctttcttctgaatcgctttctgatatcttc
aggcgtgatccaaaatgggttttagctgttgaggagagatgcaaagttttagtacttggc
aagagtagaggaattacacatggtttaaaagtccacatattttgtccaatgccaaaggag
aatagagatgctgtgaggtcaatcgctgaaagatggaagcttgcaatcaatgccggtggc
tgggacccgaagcgatttattgttatttctgttaccccaaaatcaaaggccccagctcgt
gtgataggggttaagggtactccaactttaagtgcgccccttcctccggtatttgatcca
acagttgatatggacccacggcttgttgtctcgtttccagacttaccaagggacgccgat
attagtgccttggtgttgaggtttggtggcgagtgtgagctggtttggttgaatgacaag
aatgctttggctgtttttcatgatcctgctcgagctgcaactgcaatgaggaggttggat
cacggaacagtttatcagggagctgttttggtcgccccaaatgttgcatcttcagctacc
aatgcctggggaggagctggggcagcaaaaggaggagcggcgttagcatcaacctcagct
tcaagaggcaactcatggaaaaaggctgtggttcaagactctgattggaaagaagattct
tggggtgatgaaggtttggctactggttctgtccagccatctgtttggaagaaagaagca
cctatagctgcttctttaaaccgttggaatgtcttggagcatgagtctggttcgggttca
agttcgtcctcattgacaaccgttagagctgaagtctctgggaagcaagttgaaaatagt
gctgtctcaacgtttgtgtctggtgcaggtggctcaaatggagaaggaaactcggatgca
gcagaggtttctgaagtagttgatgattgggagaatgcttatgagtga
DBGET
integrated database retrieval system
