Cajanus cajan (pigeon pea): 109790719
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Entry
109790719 CDS
T04868
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109790719
Spliceosome [BR:
ccaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109790719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF6660
Motif
Other DBs
NCBI-GeneID:
109790719
NCBI-ProteinID:
XP_020205519
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MACSLKIDEGVSSPTEKQCELTEPSKVVHFRNLPNECSEDDLAELCTPFGKVVNVVCCVG
LNKNQGLVEFEDINQAISMVSHYASSSDSMRIRGRIVYVQHSDRPDIAVNKFGKGNTLLV
TMKGLLQGRKIGIDLIHSALVQYNDIKSASLAKDVLDRRSIPRHYLPDHVGNIDLRISYS
AHQDLNIKFQSDRTRDYTNPMLPLSQYSIDGPLPHATLQPPENHVLWASFKNLQYDVNVD
VLHAVFSEIGTVEKISIFERNGQTQALIQYPDVETAKMAKRTLEGLCIYNDGSELHLSYS
RHSDVIVRGSSDKSRDYTTSPQVTETALQNPQTASMYPGIFHPLQAQVYGGIPSWNPVPS
YMLAYGTFPDQTYAVPQVPAHAVGQSHGNGMAHNENNTEPSPSEVPSFSHNMQPSIVGFY
PAPLVYYYGY
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttctctcaaaatcgacgagggagtgtcttcaccaactgagaaacagtgtgag
ctcactgagccgtcaaaggtggtgcactttcggaaccttcctaatgaatgctccgaggat
gatctcgcagagttgtgcactcccttcggtaaagttgtcaacgttgtatgctgtgttggg
cttaataagaaccagggtctggttgagtttgaggatataaatcaagccatttcaatggtt
tcacattatgcttcgtcctcggattctatgcggattcgtggtagaattgtttatgttcaa
cattctgacagaccggatattgctgttaacaaattcggtaaaggaaataccttgttggta
accatgaaaggcctcctccaaggccgaaaaataggcatcgatcttattcactcggctttg
gttcaatataatgatattaagtctgcttctttggctaaggatgttttggacagaagaagc
atacctagacactatctcccggatcatgttggaaatattgacttgcgcatttcatactca
gcacatcaagatctaaatattaaatttcagtctgatcgtaccagggactacacaaatcct
atgcttccccttagtcagtattctattgatgggccattaccgcatgcaacgcttcaacct
cccgaaaatcacgtgctttgggcttcatttaaaaatcttcaatatgatgtcaatgtggat
gttcttcacgcagtgttctctgaaattggaactgtggaaaaaatttctatatttgaaagg
aacggtcaaactcaggcactaattcagtatcctgatgttgaaacagcaaagatggccaaa
agaactctagaggggctttgcatatataatgatggctctgagcttcatctatcatactct
cgtcattctgatgtcattgtaaggggttcaagtgacaaaagtagagactatacaacgtca
ccacaagttacagaaacagctttgcagaatcctcaaactgcatctatgtaccctggcatt
tttcatcctttacaagctcaagtatatggaggaataccatcatggaatccagtccctagt
tacatgcttgcatatggtacttttcctgatcaaacttatgcagttcctcaggttcctgct
catgctgttggtcaaagccatggtaatggtatggctcataatgaaaataacacggaaccc
tccccatctgaggttcctagtttctcacataatatgcaacccagtattgtgggcttttac
cctgctcctcttgtttattattatggttactag
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