Cajanus cajan (pigeon pea): 109791293
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Entry
109791293 CDS
T04868
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109791293
04121 Ubiquitin system [BR:
ccaj04121
]
109791293
Enzymes [BR:
ccaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109791293
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109791293
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109791293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
CxC4
zf-Nse
zf-ANAPC11
zf-RING_16
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
109791293
NCBI-ProteinID:
XP_020206157
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSSGATHWCYECRQPIVLDGRDVVCPYCDQGFIQELDELRGTTPHHPFSSQSGEFHQMPD
IFDAIHAFMGQRGTDQRFGLMDAVDNFMRHRMAGRNSNFDVRGRSGSLPAPEQSWGVFSS
GPYLIFHGQVPGFTLANGSPRGGPRRVDFGDYFMGPGLEELIEQLTMNDRRGPPPAARSS
IDAMPIVRITQAHLRSDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHNSCPVC
RVELPPQGQVNSRGTRSWGGRNVGNNSSSSSNDSSRARESNHGRRNPLSFLWPFRSSSSN
NNHYTETGGSSSSTTPEQNNGTSYGWPFDH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggagcaacacactggtgttatgaatgcagacagccaatcgtgcttgatggg
agagatgttgtttgcccctactgtgatcaaggatttatacaagaacttgatgagttgcga
ggaaccacaccacaccatcccttttcgtcacagtcgggagagtttcatcaaatgccggac
atttttgatgctatacatgcctttatggggcagagaggcactgaccagaggtttgggctt
atggacgctgttgataatttcatgaggcatagaatggctggaaggaactcaaactttgat
gttagagggaggtctggttctctccctgctcctgaacagagttggggtgtttttagttct
ggtccttatttgatatttcatggtcaagttcctggattcaccttggctaatggcagccca
agaggtggtcctaggcgtgttgacttcggtgactactttatgggtcctggactggaagaa
cttatcgagcaactcaccatgaacgaccgccgcggtcctcccccagctgcacgatcttca
attgatgcaatgcctattgttaggataacacaggcgcatctacgctcagattcacactgt
ccagtttgcaaagaaaaatttgaattgggcactgaagccagagagatgccatgcaaccat
atttaccattctgactgtattgttccttggttggttcagcataactcatgtcctgtttgc
cgtgttgagctgccacctcaaggacaggttaattcccgtggcactcgaagttggggagga
aggaatgtcggcaacaacagcagtagcagtagcaatgatagttccagggccagggagagc
aaccatggaaggagaaatccactatcatttttgtggccattccgctcgtctagctcgaac
aataatcattatactgagactgggggaagcagctcttcaaccactcctgagcagaataat
ggaacaagttatggttggccttttgatcactaa
DBGET
integrated database retrieval system
