Cajanus cajan (pigeon pea): 109792175
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Entry
109792175 CDS
T04868
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109792175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109792175
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109792175
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109792175
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109792175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
109792175
NCBI-ProteinID:
XP_020207142
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MASDTVGNGSLVPFTGDSAAVYPLHHGLPLPISRLSISWSRGNTLRLSLFAGAAAKVVEV
KVNSEDSEIPDAHWRRIAYGSVAPFALLQSQRSSISSLLKTPSPYHSDWWEHVLQYSKEI
GTLLGGSKLTNSPIIEGPNILVKTDEMPTCLQAAWELIEIFYVDKQSQAWLPERLVDWLA
DYDSLFTSTHETIHGKLVDFQKELGNIQVIEDDPRYWDLLSSALSVGWLDVVVRMLRLHG
SYQLDQLSNRELENGLVEAVAVLISKMPRLRPESDGKLGDCYKSKPDFIKAWEKWRSQIT
KLDHSPFWIQCDNQQTHEGLRNLLQIMLGNIESLCLATCYWIELYISHFLYIRPFTMGIE
SMYNLAEKCIQLKPQSSIHRLTGLMIGILEENTEVVLAECSREFGPWLVAHAIELLTTGS
EQSEILLHEDRYNLGGISIVELHRLAYAQILSSHALTWQIAPIYLTSCMKQGMGLLENLL
YRQSVQHNDVLLKNIEICRLYELDHISSNIMKIAGVYHWKHGHKGAGVFWLQQAQDRSCL
DRIAQQLFDSVGKSISDESFKKWEGMIELLGSESNPAGGLEFLHKYRDFKKSLKKVSGGK
STDAARQAVGSLILLMKNPSTPQRFWLPLLHDSLKLLNWQDCPLLSVSETNLLLNKLQEL
SLAKLCAHYTEPSLPPNALSSIRLALATNLGRAILDE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgacacagtgggtaatggcagtctggtccccttcaccggagactcagcggca
gtataccctctgcaccacggcctcccccttcctatttctcgcctctccatctcctggtcg
cgtggcaacactctccgcctctccctcttcgccggagcagccgccaaggtcgtcgaagtt
aaggtcaattctgaagattccgagatccccgatgctcactggcgccgaattgcatatggc
tccgttgcgcccttcgcgctccttcaaagccaacggagctctatttcttcgctcttgaag
actccatctccgtatcattcagattggtgggagcatgtgcttcagtatagcaaggagata
ggtacacttcttggggggtcaaagttgaccaatagtcctataattgagggcccaaacata
cttgttaagacagatgagatgccaacttgtttgcaagctgcgtgggagttaattgaaata
ttttatgtggacaagcaatctcaagcatggctacctgaaaggcttgttgattggttagct
gattatgacagcctctttactagtacacatgaaacaattcatggaaagcttgtggatttt
cagaaagagctgggcaacatacaggtgattgaggatgatcccaggtattgggacttgttg
tcatctgcactgtcagttggttggcttgatgttgtggtgagaatgctgcggttgcacgga
tcttaccaattagatcagctcagtaatcgggagttagaaaatgggcttgtggaggctgtt
gctgttcttatttccaaaatgccccgcttgcgtcctgaatctgatggaaaattaggtgat
tgctataaatccaagcctgactttatcaaggcctgggaaaaatggaggtcacaaatcaca
aaactggatcacagtccattctggattcagtgtgataatcaacaaactcatgagggcttg
agaaacttgctacagattatgctgggtaacatcgagagtctctgcttggctacatgttat
tggattgagttatatatttctcattttctatacatcaggccatttacaatgggaatagaa
agcatgtataatttggccgagaaatgcatccagttgaaaccacaatctagtatacatagg
ttgacaggacttatgattggaattcttgaagaaaatactgaggttgttttagcagagtgt
tccagagaatttggcccttggttggtggcacatgccattgaattgttgactaccgggagt
gagcaatcagagattcttctgcatgaggatcgttataacttggggggaatcagcatagtg
gagctacatcggcttgcatatgctcaaattctgtcatcacatgcattgacctggcaaata
gctccaatatatttaacatcatgcatgaagcaaggaatgggattgttagagaatttattg
tacaggcaatctgttcaacataatgatgtgttgcttaagaatattgagatatgccgtttg
tatgagcttgatcatatcagttcaaatatcatgaagattgctggagtataccactggaag
catggccataagggtgccggagtattctggcttcaacaagcccaagacagaagttgtcta
gataggattgcccaacagttatttgattcagttggaaagtcaatatctgatgaaagcttc
aagaaatgggaaggcatgattgaactattgggctccgaatctaaccctgccggaggtctt
gaatttttgcacaagtatagggatttcaagaaatcccttaagaaggtatctggtggaaaa
tcaactgatgcagccaggcaagctgtaggctcactcatactgcttatgaaaaatccatcg
acccctcagcgcttttggctgcctcttctgcatgattcgttaaagctgcttaattggcag
gattgccctcttctaagtgtctccgagaccaatcttctgttgaacaaacttcaagagtta
tcgctggcaaaactgtgcgcccactatactgaacctagcttacctcctaatgcactaagc
tctattaggcttgctctagctacaaatcttggtcgagccatacttgatgaatag
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