Cajanus cajan (pigeon pea): 109792244
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Entry
109792244 CDS
T04868
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109792244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109792244
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109792244
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109792244
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109792244
PBAF complex
109792244
GBAF(ncBAF) complex
109792244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
109792244
NCBI-ProteinID:
XP_020207227
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MPPSPSFPSASENRTKWRKKRRRESHKRHADRDDSDQDDRPDEGDSDDQFRRPNARVEIE
AVSRDGLQISQFPPAIKRAVIRPHSAVAAIAALESGRGQSQHEVPVLENVSHGQLQAVSA
VTADCLGGDGSAFVAAPPPVLRGSGVVKRFGSRVLVVPMHSDWFSPATVHRLERQAVPHF
FSGKSTDHTPEKYMECRNYIVARYMEDPGKKITVSCLGLSVGVGNEDLTRIVRFLEHWGI
INYCARCPSHKYPDNETCLKEEKSGAICVPSVALRSIDSLIEFDKPKCKFKADEIYSSRT
VHNTDISDLDGRIREHLSENHCHYCSRSLPVAYYQSQKEVDILLCADCFHDGRFVTGHSS
IDFIRVDSTTDYGDPDGDSWTEQETLLLLEAVEVYNDNWNEIADHVGTKSKAQCILHFLR
LPVEDGKLENMNVSSLSLSSNVMNQDDNGRLRCCSNGYSAGPVHYSRDSDGRLPFANSGN
PVMALVAFLASAVGPRVAATCAHAALAALSGNNSGSTTHIEAPENVNRTNSEIMHSRDGG
HHGEFANSDQKNGSYEDKAKVLGSCAQNDGGSTLLSAEKVKDAAKVGLSAAAMKAKLFAD
HEEREIQRLCANIVNNKLKRLELKLKQFAEIETQLMKECEQVEKVRQRYASERSHVVSAR
LGNGGTTPMNVAGVGPSMANNNSNSRQQMVSASSSQPSISGYGNSQPVYPHMSFAPRPSM
FGLGQRLPLSMIQQSQSQSQSASSNPMFNGPGDVQPNPNHSFSRPVSRTNSGLG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgccaccttccccttccttcccctcagcctcagagaaccgaaccaaatggaggaagaag
cgccggagggagtcccacaagcgccatgccgaccgcgacgattccgaccaggacgaccgt
cccgacgaaggcgattccgacgaccaattccgcaggcctaacgcgcgcgtggagatcgag
gcggtgtcgcgcgacggactccagatttcgcagttcccgccggcgatcaagcgcgccgtt
atccgacctcactccgcggtggcggcgattgcggcgctggagtccggcagggggcagtcg
cagcacgaggttccggttctggagaatgtgtcgcacgggcagcttcaggcggtgtcggct
gtgaccgccgactgccttggcggcgatggctcggccttcgttgctgctccgccgccggtt
ttgagaggctccggcgtcgttaagcggttcgggagtagggttcttgtagttcctatgcac
tcagattggttttcaccagccacagtgcatcgacttgagagacaagcagtgccacatttc
ttctctggaaagtcgacagatcatacgccagagaagtacatggaatgtaggaattacatt
gttgcaagatacatggaggacccggggaagaagattacggtctcttgcctgggattgtca
gttggtgttggaaatgaagatttaactcgaattgtccggttccttgagcactggggaatt
atcaattactgtgctcggtgcccaagtcacaagtatcctgacaatgagacttgcctgaag
gaggagaaaagtggtgcaatatgtgtgccatcagtggctttaagatccatagatagtttg
attgaatttgacaagcccaagtgtaaattcaaagcagacgaaatttattcatctcgaaca
gtgcacaatactgatatttctgatttggacgggagaataagagagcatctatcagaaaac
cattgccattattgttctcgctctcttcctgttgcatactaccaatcacaaaaagaggtt
gacattttactctgcgctgattgctttcatgatgggagattcgtcactggtcattctagt
atagattttataagggtggattctactacagattatggtgatccagacggggatagttgg
actgaacaggagactttgctgctgcttgaagcagtggaggtttacaatgacaattggaat
gaaattgctgatcatgttggtacgaagtcaaaagcacaatgcattcttcatttcctccgt
ctacctgtggaagatgggaaattggaaaatatgaatgtttcaagcttgtctttgtcatcc
aatgtgatgaatcaagatgataatggaagattgcgttgttgctcaaatgggtattctgca
ggacctgtacattacagccgagattctgatggcaggcttccttttgcaaattctggaaat
ccagttatggcactggttgcctttttagcctcggctgttggaccaagagtagctgcaact
tgtgctcatgcagcattagctgctttgtcagggaataattctgggagcactacacatata
gaagcaccggaaaatgttaataggacaaattcagaaatcatgcatagtagagatggtggc
catcatggagagtttgcgaactcagatcagaaaaacggtagttatgaggacaaggcaaaa
gtacttggttcatgtgctcaaaatgatggtgggtcgaccctgttatctgctgagaaagtc
aaagatgctgcaaaagtaggcctctctgctgcagcaatgaaagctaagttgtttgctgat
catgaagagcgagaaattcagagactatgtgctaatattgttaataataagttgaaaaga
ttggaactgaagctgaagcagtttgcagaaattgaaacccagttgatgaaagaatgcgaa
caagttgagaaggtgaggcagaggtatgcttctgaacggtcgcatgttgtatcagcacgt
cttggaaatggtggaaccactccaatgaatgtagcgggtgttggtccttccatggctaac
aataatagcaacagtaggcaacaaatggtttctgcttcttcctcacagcctagcatctca
ggttatggtaacagccaaccagtttatccacacatgtcctttgccccacggccttcaatg
tttgggttagggcaaaggttgcccctttcaatgatacaacaatcgcaatcacaatcacaa
tcagcatcttcaaatccaatgttcaatggtcccggtgatgttcagcctaatcccaatcat
tcattttcgaggcctgtgtcaaggactaactctggtttaggttaa
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integrated database retrieval system
