Cajanus cajan (pigeon pea): 109792651
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Entry
109792651 CDS
T04868
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109792651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109792651
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109792651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
109792651
NCBI-ProteinID:
XP_020207664
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MLSEGFEDEEKWLAEGIAGIQHNAFFMHRALDENNLRDALKYSAQMLSELRTSRLSPHKY
YDLYMRAFDELRRLEIFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYLRCKD
APARDVLKDLVEMCRAVQHPIRGLFLRSYLSQISKDKLPDIGYEREEGESNGVMDAVEFV
LQNFTEMNKLWVRLQQQQGPSRIREKREKERNELRDLVGKNLHVLSQIEGVDLGMYKDTV
LPSVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLEILLGACPQLQPTVDIKTVLSQL
MDRLSNYASSSTEVLPEFLQVEAFTKLSTAIGRVIEAQVDMPLVGAISLHVSLLTFTLRV
HPDRLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSAPLDKYNDIVTALTLSNYPRV
MDHLDHETNKVMAMVIIQSIMKNNTYISTADKVEVLFELIKGLIKDLDETTEDEVDEEDF
NEEQNSVARLIHMLHNDDPEEMFKIICTVKKHIMSGGPRRLPFTVPSLIFSALRLIRQLQ
GQDGDIVGEEVPTTPKKIFQLLNETIEALASVSSPELALRLSLQCAGAANDCDLEPVAYE
FFTQAFILYEEEIADSKAQVTAIHLIIGTLQRMHVFGIENRDTLTHKATGYSAKLLKKPD
QCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVTLFVEI
LNKYIYYFEKGNPQITSSTIQGLIELITTEMQSDSVTALPASDAFFTGTLRYIQFQKQKG
GILGEKYDPIKVYIPA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgaaggattcgaggacgaagagaaatggctcgcggaagggatcgccggaatt
caacacaacgcattcttcatgcatcgcgcgcttgacgaaaacaatctcagagacgctctc
aaatactccgcgcagatgctatcggagcttcgaacttccaggctctcaccgcacaagtac
tacgacctgtatatgcgagccttcgacgagcttcggaggctggagatttttttcaaagac
gaaagcagacacggcgtttccattgttgatctctacgaacttgttcagcacgccggaaat
atattgcctagactgtatctcctttgcacggtgggatcagtttacctgcgatgcaaggat
gctccggcaagggatgttcttaaagatctagtggaaatgtgtcgcgctgtgcagcatcca
attcggggtctatttttgaggagttacctttctcaaatcagtaaggataagttgcctgat
attggctatgaacgtgaagagggggaatctaatggtgtgatggatgcagttgaatttgtt
ctacagaattttacagaaatgaataagctttgggttcggttgcagcagcaacagggaccc
agtcggataagagagaagagggaaaaggaaaggaacgagcttcgtgatctggtagggaag
aatctacacgttctgagtcaaattgagggtgtggaccttgggatgtacaaagacaccgtc
cttccaagtgtcttagagcaggttgtcaactgtaaagatgagcttgcccaattttatctt
atggagtgcataatacaggtttttccagatgagtaccatttgcagacacttgagatactg
ttaggtgcttgcccccaattgcagcccacagtagacatcaagacagtgttatctcagtta
atggacaggttgtcaaattatgcttcctcaagtactgaagtattgcctgaatttctgcaa
gtggaagcatttaccaaattaagcacagcaataggcagggttatagaagcacaagttgac
atgcctctagtgggagcaatatctttgcatgtttctctacttacatttactctccgtgtt
catccagatcggcttgattatgtggaccaagtactgggatcatgtgttaagaaactttct
ggaaaaccaaagctcgatgacaatagagcaacaaagcaagttgttgcacttttaagtgct
ccacttgataaatacaatgatattgtgactgctctgacactgtccaattatcctcgagta
atggatcatcttgatcatgaaacaaataaagtcatggccatggttattatccaaagcatt
atgaagaataacacttacatctctactgctgataaggttgaagttttatttgaattaata
aaagggcttataaaggacttggatgaaacaactgaggatgaggttgatgaagaagatttt
aatgaggaacaaaattctgtcgctcgccttatccacatgcttcataatgatgacccagag
gaaatgtttaagataatatgtaccgtaaagaagcatattatgagtggaggaccaaggcgc
ttaccttttacagttccttccctgatattttctgcacttaggttgatcaggcaattgcaa
gggcaggatggagatatagtgggagaagaagttcctacaacaccaaaaaaaatatttcaa
cttttaaatgagaccattgaagctcttgcttctgtatcatctcctgaactggccctgaga
ctgtctctgcaatgtgctggggctgctaatgactgtgacctggagcctgttgcttatgaa
tttttcactcaggcattcatattatatgaagaagaaattgcggactctaaagcccaggta
actgcaatacatttaattatcgggactcttcagagaatgcacgtctttggcattgagaac
agggatacattaacacacaaggccacagggtattcagcgaagcttttgaagaaacctgat
cagtgtcgagcagtttatgcatgctctcatctcttttgggttgatgatcaagatggtatt
aaagatggagaaagggtattgctttgccttaagcgtgctttgaggattgcaaatgctgct
caacaaatggccaatgtagctaggggtagcagtggtccagtaacgctatttgttgaaata
ctgaacaagtacatttactattttgagaaaggaaacccgcagatcactagttctactatc
caggggcttatagaattgatcacgactgagatgcagagtgactctgtaacagctcttcca
gcttcagatgctttttttactggcacattgaggtacatccaattccagaaacagaagggt
ggtatactaggtgaaaaatatgaccctatcaaggtctacatccctgcctag
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