Cajanus cajan (pigeon pea): 109792886
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Entry
109792886 CDS
T04868
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109792886
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109792886
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109792886
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109792886
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
SR proteins
109792886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
PRP38_assoc
RRM_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
109792886
NCBI-ProteinID:
XP_020207929
LinkDB
All DBs
Position
Unknown
AA seq
234 aa
AA seq
DB search
MADSPLARNSRSPLWKAQSRSRSRSRSRSRSRSRPRQRPRSRSRSRGRSRSRSHGRSEPS
NPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMETVDDAER
CIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKNTREYGYRGDRGRYRDGPERDDY
SRRRSPRRSPPYRGGQDYSPRRSPYGGRSRRERSRSLPYSPHGSPDRKYARGSR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcccctctcgcaaggaattcaaggtccccactgtggaaagctcagtctaga
tcgaggtctaggtcgagatctaggtcaaggtctaggtctaggccgagacaaaggccaagg
tcccgttctaggagtcgtggcaggtcaaggtctcgaagtcatggaaggtctgagccttca
aatcctggtgacacactttatgtaactggtctgtcttcaagggtcactgaaagagaccta
gaggagcatttctccaaggaaggaaaggtttcttcatgttttcttgtggtggagccccgc
acccggatttctcgtggttttgcttttgttacaatggaaactgttgatgatgcagagcgc
tgtatcaagtatctcaatcaatcagtcttagagggtcgttacatcactgttgaacggtca
cgaagaaaacgtgcaagaactccaaccccagggcactatcttggactgaaaaacactaga
gagtatggctatcgtggtgaccggggaaggtatcgtgatggtcctgagcgcgatgattat
tcacgtcgtaggtctccaaggcgttcacctccatacagaggtggccaagattattctccc
cggcgctcaccctatgggggaaggtctaggagggagagatctagatcgcttccttattct
ccacatggtagcccagacaggaagtatgctcgtggatctaggtga
DBGET
integrated database retrieval system
