KEGG   Cajanus cajan (pigeon pea): 109793383
Entry
109793383         CDS       T04868                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109793383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109793383
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109793383
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109793383
NCBI-ProteinID: XP_020208434
LinkDB
Position
Unknown
AA seq 301 aa
MGVPNASEDLSSEMEVDAFRQLFPLRFFERHLAESIRPDGRPLGKARETSICLGAVASAN
GSALVKIGSTTMLTAIKMEVMTPSFESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVS
KQLSDTISSSRMIDLKELSLVSGKAAWMAYLDVYCLDADGALFDTALLSAVAALSHLQFP
AVAMNDDGKIVLVSDEDGQKRAQEPVNKEKRKLTLKSIPFSLTCILHKNYILADPTAEEE
SIMETHVTIVLDTSGQLISLYKPGGPVLAYTSAIQDCVAITRQRVKELKSFLDNENSAME
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggagtaccaaatgcttctgaggacttgtcatcagaaatggaggtagatgcctttaga
cagctctttccacttcgtttttttgagcgtcatcttgctgaatctatacgccctgatggt
agaccacttggaaaagctagagaaacaagcatttgtcttggtgctgttgcctctgctaat
gggtcggctcttgtgaagattggatcaactactatgttgactgctattaaaatggaagtt
atgactccctcctttgagtcaccagatgagggctgtctagctattgatttccacatgcct
ccaatttgttctccaattgttaggcccggcaggcctgctgaagcatcaccagtggtgtca
aaacagttgtctgacaccatttcaagttctagaatgattgatttgaaagaattgtccttg
gtcagtggaaaagctgcttggatggcttacctggatgtctattgtttggatgctgatggt
gctctttttgatactgctttactttctgcagttgctgccttatctcatctgcaatttcct
gctgttgccatgaatgatgatggcaaaatagtacttgtgtctgatgaggatggacaaaag
cgggcacaggagccagtcaataaggagaagagaaagcttacattgaaaagcattccattc
tctttgacatgcattcttcacaagaattacatcttggcagatcctactgcagaagaagaa
tccatcatggaaacccatgtaacaatagttttggatacatccggtcaactaatatctctg
tacaagcctggtggtccagttcttgcctatacttctgctattcaggattgtgttgcgata
acccgacaaagagtgaaggaactaaagagcttcttggacaatgaaaattctgctatggag
gtttga

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