Cajanus cajan (pigeon pea): 109795009
Help
Entry
109795009 CDS
T04868
Name
(RefSeq) RAN GTPase-activating protein 2 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109795009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109795009
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109795009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_8
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
109795009
NCBI-ProteinID:
XP_020210000
LinkDB
All DBs
Position
2:32325035..32328010
Genome browser
AA seq
565 aa
AA seq
DB search
MFYFLRLYLIPHWGYASTNAIAYQLFSLTSFIAMELNSQQRPFSIKLWPPSQNTRQTLVE
RMTNNLTTKSLFTQKYGTLDREEAEENAKRIEDVAFTTANLHYEKEPDGDGGSAVQLYAK
ECSKLLLDVLKRGHGKEDNKELVTSVNTTALRESVFDISKGQRTFIEADEARELLSPLKE
VGNSFTKICFSNRSFGVGAAQVAEPILSSLKDQLKEVDLSDFIAGRSEAEALAVIKIFST
ALEGSVLKSLNLSDNALGEKGVRAFGALLKSQKCLEELYLMNDGISKEAAQAVSELIPFT
EKLKVLHFYNNMTGDEGALAIAEVVKCSPLLENFRCSSTRIGTEGGVALSDALGSCTHLK
KLDLRDNMLGVEGAVSLSKALTKHAELREVYLSYLNFEDDGAIAVVDALKESAPHLEVLE
MSGNDITADAAPAIAACVAAKQFLSRLNLSENELKDKGANLISKALEGHVQLKEIDLSSN
QITRAGAQQLAVTVVQKTDFKLLNINGNFISDEGIGELMKIFKKSPGTLGPLDDNDPDGE
DNNEESDEEGGADELESKMKNLVVD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgttttattttctccgattgtatttgataccacattggggatatgcatctacgaatgcc
attgcttatcaattgttttcactaacaagtttcattgccatggagctgaattcacagcag
agaccattttcaatcaaattatggcctcctagtcagaacactagacagacccttgtggag
aggatgaccaacaatctgactactaaatctcttttcacacagaagtatggaactttggac
agggaagaggctgaagagaatgcaaagaggattgaagatgtggcttttacaacagcaaat
ctacactacgagaaagagccagatggtgatggaggttctgcagtccagctttatgccaaa
gaatgtagtaagctcctcctagatgttcttaaaagaggacatggtaaagaggataacaaa
gaattggtgacatctgttaataccactgcacttcgtgaatctgtttttgatatatctaaa
ggccaaaggaccttcattgaagcagatgaggcacgagaactcttaagtccattaaaggaa
gtgggaaattctttcaccaaaatatgctttagcaacagaagctttggagtaggagcagcg
caagttgcggagcccatactcagttccctcaaggaccaattgaaagaagtagatctatca
gattttattgctggaagatcagaagcagaagctcttgctgttatcaagatattctcaact
gccttggaaggcagtgtcctcaagtctttaaacctctctgacaatgcattaggtgagaaa
ggtgttagagcatttggagcacttctgaaatcacagaaatgtttggaggagctttatttg
atgaacgatggaatctcaaaggaagctgctcaagcagtttctgagttgattcctttcaca
gagaaactcaaagttcttcatttttataataatatgactggagatgaaggcgcattagct
atagctgaggttgtgaagtgttctcctttattggagaattttcgttgttcctccacaagg
ataggcaccgagggtggagttgccttatctgatgctttaggaagttgtacccatctgaag
aagcttgatttacgagataacatgttaggtgtggagggtgcggtttctctgagcaaagct
cttaccaagcatgcagagctaagagaggtatatctgagctacctgaactttgaagatgat
ggtgcaattgctgtagttgatgcccttaaggaatcagctccacatcttgaagttctagag
atgagtggaaatgacattacagctgatgctgctcctgcaatagcagcctgtgtagcagcg
aagcagtttctttccaggctgaacctctctgagaatgaactcaaggataaaggtgccaac
ctgataagtaaggctctagaaggccatgtccaattaaaggaaattgatctaagttccaac
caaataaccagagctggggctcaacaattggctgtgaccgtggtgcaaaagactgatttc
aaacttctgaacattaatgggaacttcatttctgatgaaggcattggtgagttgatgaaa
atatttaaaaaatctccaggcacgcttggtccattagatgataatgaccctgatggagag
gacaataatgaagaatctgatgaagaaggtggtgcggatgaactggagtccaaaatgaag
aaccttgtagttgattaa
DBGET
integrated database retrieval system
