Cajanus cajan (pigeon pea): 109795304
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Entry
109795304 CDS
T04868
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaj03016
]
109795304
Transfer RNA biogenesis [BR:
ccaj03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109795304
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_Gbeta
NBCH_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
109795304
NCBI-ProteinID:
XP_020210349
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Position
2:complement(33096236..33101317)
Genome browser
AA seq
836 aa
AA seq
DB search
MPSGGEVEVKRVFIGAGCNRIVNNVSWGASGFVSFGAHNAVAIFCPKSAQILTTLPGHKA
VVNCTHWLPTSKFLFKAKQLEQHYLLSGDADGVIILWELSLTDGKWRQVLQLPQLHKKGV
TCISGIMVSQTEAMFASSSSDGSVCVWEVVFPLTAGGDCKLSSRDSFSVGSKSMVALSLA
ELPGDSGQIILAMGGLDNKIHLYCGGRKGKLAHACELKGHTDWIRSLDFSLPISINGEVN
NIFLVSSSQDKGIRIWKMALCSSVSNGHGISRKGEISLSSYIEGPVLLAGSSSFQISLES
LLIGHEDWVYSVMWQPPLVASREEDAYYQPLSILSASMDKTMMIWQPEKTSGVWMNVVTV
GELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGNDNWLPQKVPSGHFASVTDIAW
ARTGDYIMSVSHDQTTRIYAPWKVEASLEDGEFWHEIARPQVHGHDINCMAVIHSKGNHR
FVGGADEKVARVFEAPLSFLKTLNNATLQKSCSSDDVMGDVQILGANMSALGLSQKPIYV
QAVHEAPERSGIDGIDTLETIPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFAL
CCDHKGELVASSCKAQSAAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVS
RDRQFSVFSITKTGTGEISHSLLARQEGHKRIIWSCSWNPHGNEFATGSRDKTVKIWAIE
RESSVRLLTTLPQFMSSVTALSWIGLHHQKNYGLLAVGMENGQIEMWNLSYNRADNGSIA
TPGLAASLAVRIDPFICHASTVNRLAWKKNEDDHTSMQLASCGADNCVRVFDVTVK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtggtggcgaagttgaagtgaaaagggtgttcattggagcggggtgcaacaga
atagtgaacaacgtttcatggggcgcttctggtttcgtctcttttggagctcacaacgcc
gttgctattttctgtcccaagagtgctcaaattttgactactcttccgggtcacaaagca
gttgtgaattgcacacactggctcccaacttccaagttcttatttaaagcaaaacaattg
gagcagcattatttgctatctggagatgcagatggtgtcattattttgtgggaactgtcc
ctaactgatgggaagtggaggcaagtgttgcaactgccacaattacacaagaaaggtgtt
acatgcatcagtggaattatggtttctcaaactgaagcaatgtttgcttcttcttcgtca
gatggctctgtttgtgtgtgggaagttgtatttcccctgactgctggcggtgactgtaaa
ttatcaagccgggattctttctctgttggttccaaatctatggtagccctatcattagct
gaattacctggagatagtgggcaaattatccttgcgatgggaggattggataacaaaatt
cacctttattgtggtggaaggaaaggaaagcttgcacatgcatgtgagctaaaagggcat
acagattggatacggagtttggacttctcattacctataagcatcaacggggaagtaaac
aatatttttctggtgagttcatctcaggataaaggcatacgaatatggaagatggcattg
tgcagctctgtgtccaatggacatggcatatccaggaaaggagaaataagtttatcatcc
tatatagaaggtcctgtacttttggctggttcatcttcttttcagatatccttagaatct
cttttaattggacatgaagattgggtatattcagtaatgtggcaaccccctttggttgca
tccagggaagaggatgcctattatcaaccactaagtatcttatctgcatctatggacaag
actatgatgatctggcaacctgaaaagacttctggtgtctggatgaatgtagtcactgtt
ggggaactaagccactgtgctctggggttctatggtggccattggagcccaaatggagat
tcaattttagcacatgggtatggtggatcttttcatctttggaaaaatgttggtaatgat
aattggctgccacaaaaggttccctctggtcattttgcgtcagtgactgatattgcatgg
gctagaactggtgattatattatgtccgtcagtcatgaccagacaactagaatttatgct
ccatggaaagtcgaggcttctctcgaagacggagaattttggcatgaaatagctcgtcct
caagttcatggtcatgatataaattgtatggcagttattcatagtaaggggaatcatcgt
tttgtcggtggagctgatgaaaaagttgccagagtgtttgaagctccattatcttttctg
aagacattaaataatgccaccttgcagaagtcttgttcttctgatgatgtcatgggagat
gttcagattttgggtgcaaatatgtcagctcttggactatcacagaaacctatttatgtt
caagctgtacatgaggcccctgaaagaagtgggattgatggtattgacacccttgaaact
attcctgatgccgttccaactgtgttcactgaacctccaattgaagatcaactggcttgg
catacactttggcctgaatcgcacaaactctatggtcatggaaatgaactattcgcttta
tgctgtgatcataagggagagcttgttgcttcttcctgcaaggcccaatctgcagctgtt
gcagaggtgtggctttggcaggtgggttcatggaaagcggttggccgcttgcaatcccac
agcttaacagtgacacagatggagttctcacatgatgacaactttcttttgactgtctca
agggatcgccagttctccgttttttcgatcacaaaaacaggcactggtgaaattagtcat
agtcttcttgcaaggcaagaggggcacaagcggattatctggtcatgttcttggaatcca
cacggtaacgaatttgcaacaggttcgcgggataagacagtaaaaatttgggccatagag
agggagtcatccgtcaggctgcttacgactttacctcaatttatgagtagtgtgacagca
ctatcttggattggtctccatcatcagaaaaattatggacttctagctgttggaatggaa
aatggccaaatagaaatgtggaatctgtcttataacagagcagataatgggagcatagct
acaccaggtttggctgcttctcttgctgtacgtatagatccttttatatgccatgcctct
actgtaaaccgtctagcatggaagaaaaatgaggatgatcacacaagtatgcaactggct
tcttgtggagctgataattgtgtaagagtttttgatgtaactgttaagtaa
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integrated database retrieval system