Cajanus cajan (pigeon pea): 109795355
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Entry
109795355 CDS
T04868
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109795355
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109795355
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
109795355
NCBI-ProteinID:
XP_020210414
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Position
2:2804568..2811310
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AA seq
637 aa
AA seq
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MASQAVQLRIEHSRVVMDNGIVQVYLSNPGGFVTRIQYNGTDNLLEILNERDNRGYWDVV
WSEAGSTGTTGTFERIVGTSFSVVTENEERVEISFTSKWDPSLKGKRAPLNIDKRYVMLR
DSSGFYSYAIFEHLVEWPAFNIPQIRIVYKLRKDIFDYMVVSDNRQRFMPLPDDRLPGRG
KELVPPEAVLLVNPVEPEFKGEVDDKYQYSSENKDLKVHGWISSQSETDPAMGFWVIIPS
NEFRSGGPVKQNLTSHVGPISLAMFLSAHYAGEDIVLKLQPNEPWKKVFGPTFVYLNTLL
DADDPVQLWEDAKNQMEEEVESWPYDFPASEDFQKSSQRGSVCGTLLVRDRYLSDEYIIA
RDAYVGVAPPGEAGSWQRECKGYQFWSRANEEGYFSINNIRMMLYYLFILQSLLMQYAGC
EIDVGEIIYEPPRDGPTLWEIGIPDRSANGFYVPDPNPNFINKLFVDHPDKFRQYGLWER
YAELYPNEDLIYTVGASDYTKDWFFAQVTRKQEDGSYKGTTWRIKFNLDEVEPSKIYKLR
LALASANVSELQVRVNDPKQDPPLFTTGVIGKDNAIARHGIHGLHWLFSIDIPALLLQNG
VNTIFLTQTMASGPLPLFQGIMYDYIRLEGPTPFPPI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacaagcagtgcagttgcgtatcgaacacagtcgagtggttatggacaatggc
atagtgcaagtgtatttatccaacccaggtggatttgttaccagaatacaatataatggc
actgataatcttcttgaaattcttaacgaaagagataatagagggtattgggacgttgtt
tggagtgaagctggaagcacaggaacaactgggacatttgaaaggattgtgggaacaagt
tttagtgttgtgacggaaaatgaagaaagggttgaaatctcgttcactagtaagtgggat
ccatctctgaagggaaagagagcacctcttaatatcgacaaaaggtatgtgatgcttcgt
gattcgtcgggattctattcttacgccatttttgagcacttagtggaatggcctgctttc
aacatacctcaaataaggattgtttacaagcttcgtaaagacatatttgattacatggtg
gtgtcggataatagacaaagatttatgcctcttccggatgatagattaccgggaagagga
aaagaactagttccacctgaggcagttttgctcgtcaatcctgtggagccagaatttaag
ggagaggtggatgacaagtaccaatactcgagtgagaacaaagatcttaaggttcatggg
tggataagttcccaatccgaaacagatccagccatgggattttgggtaatcatacccagt
aatgagttccgatcgggtggcccagttaaacagaaccttacttcccacgtaggcccaata
agcctcgcgatgtttcttagtgctcactacgcaggagaggatatagttttgaaactccag
cctaacgagccgtggaagaaagtttttggaccaacttttgtttatctcaacactttgtta
gatgctgatgacccagtacagctctgggaggacgctaaaaaccagatggaggaggaggtt
gagagttggccctatgattttccagcttcagaagattttcaaaagtctagccaacggggc
agtgtgtgtggcacattactagttcgagacaggtatctaagtgatgagtacataatagca
cgagatgcatatgtgggagtggcaccaccaggagaagctggatcttggcaaagagaatgc
aagggataccagttttggagtagagcaaacgaagaagggtacttctcaatcaacaatata
cgcatgatgttatattacttgtttatacttcagtccttgttaatgcaatatgcaggttgt
gaaatagatgttggtgaaattatttatgagccaccaagagatggcccaacattatgggag
ataggaattcctgatcgctctgctaatggattctatgttcctgatcctaatcccaacttc
ataaacaagctttttgtcgaccatccagacaagtttaggcagtatggattgtgggaaaga
tatgcggagttgtacccaaatgaggatttaatctatacagtgggtgccagtgactacaca
aaagattggttctttgcacaagtcaccaggaagcaagaggatggcagttacaaaggaact
acatggcgaattaagttcaacctcgatgaagtggagccaagtaaaatctacaaattacgg
ttggcacttgcaagtgcaaatgtctctgagttacaggtgagagtgaatgatccaaaacaa
gatcctccattgtttacaacaggagtgattgggaaggacaatgccatagctagacatgga
attcatggactccactggctattcagcatcgacatacctgctcttctgctacagaatggt
gttaacactatatttcttacacaaactatggcttctggtccattgcccctcttccagggc
ataatgtacgactatattcgtctagaaggtcctaccccttttcctcccatataa
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