Cajanus cajan (pigeon pea): 109795385
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Entry
109795385 CDS
T04868
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaj03032
]
109795385
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109795385
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109795385
DNA replication proteins [BR:
ccaj03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109795385
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109795385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
109795385
NCBI-ProteinID:
XP_020210454
LinkDB
All DBs
Position
2:24911021..24919206
Genome browser
AA seq
837 aa
AA seq
DB search
MEGNNTCSDQVIAEMIEMGFEYSNIVEAIKEVGLSVPRVVEHILKTPKLQEHNKNPLRRQ
PLRTCRLVRQSKIFDHFHSNDVQEHTEDFPDPIPFVLSEPFQVQDSDVASDWERKVSNLM
QKHFGFSSLKSFQKEALSSWVGHKDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISL
MHDQCLKLTKHGISACFLGSGQLDNTVEKKAMGGLYNIVYVCPETLLRLIQPLQKLAESR
GIALFAIDEVHCVSKWGHDFRPDYSRLSVLRENFSASKLKSLKFDIPLMALTATATKRVQ
EDILKSLRMSKETNVVLTSFFRSNLRFMVKDSRTSKASYAKDFCELIEVYGRKQNIDGNE
KAFMSDDSDYVSHGSDACSSSDTDSVSPDDVDDNQDDYAYKDDFLMGRELSVEFLENDMD
VVQNVDKSHVIHGEKPPHMGLELPEAIDPPKKPEGLKFLKEPLEHGPAIIYVSTRKETSR
IAKYLCMFGVKAAAYNAGLPKLNLRRVHKGFHENTLEVIVATIAFGMGIDKSNVRRIIHY
GWPQSLEAYYQEAGRAGRDGKLADCILYANLASKPSLLPSRKSEEQMKQAYIMLSDCFRY
VMNTSCCRAKTLVEYFGEDFSHQKCLLCDVCTNGPPQRLNLKEEACILLQTVGAHNVCND
PLDCSYEDDIYSGSKHRGLRERPNLKVLVVKIRQQYQKFLTTDILWWRGLARLLEIKGFI
REGDDKIHVQVKYPEPTELGMEFVKSMSEQDFYVYPEADMLLTRKSNKPFSSFSEWGRGW
ADPEIRRQRLEKMNLNKKPKMLPSPKNKRQRRRKGKKWQSDLRTSRGRLVAKLTKFK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaacaacacatgttcggaccaagtgattgcagaaatgattgaaatgggtttt
gagtattcaaatatcgtcgaagccataaaagaagtgggtctctctgttcctagggttgtg
gagcacatcctcaaaacccccaaattgcaagaacacaacaagaaccctctcagaagacaa
cctttgcgcacgtgtcgtctagttcggcagtccaagatattcgaccatttccactccaat
gatgtccaagaacacacggaggatttccctgatcccattccatttgtgctttcagagcca
tttcaagttcaagattcggatgttgcatcagattgggagcggaaagttagcaacttgatg
caaaagcattttgggttttcatccttgaagagttttcagaaggaagccctctcttcctgg
gttggtcataaagactgtcttgtcctcgctgcaacaggatctggcaagtctctatgcttt
cagattcctgcattgttgtccgggaaagtcgtggttgtgatttcgcccttaataagcctc
atgcacgaccagtgtttaaagctaacaaaacatggaatcagtgcttgctttcttggctcg
gggcaacttgataatactgttgaaaagaaagcaatgggaggcttgtataatatagtttat
gtctgcccagagacactgttgagattgattcagccactgcaaaagcttgcagaaagtcgc
ggtattgctttatttgcaattgacgaggtacattgtgtttctaaatggggtcatgatttc
cgtccggactacagccgactgtctgtgctgcgggaaaatttcagtgctagtaagctaaaa
tccctgaaatttgatatacctctgatggccttgacagctacggctacaaaaagagttcaa
gaagacattttaaaatcactacgcatgtcaaaagaaacgaatgttgttcttacatcgttt
tttcgatctaatttacgcttcatggtaaaggatagtcgaacatcaaaggcttcttatgca
aaagacttttgtgaattgattgaagtatatggtagaaagcaaaatattgatggaaatgaa
aaggctttcatgtcagatgattcagattatgtttctcatggctccgatgcttgtagtagc
tctgatacagacagtgtttctcctgatgatgtggatgacaaccaagatgattatgcttac
aaagatgattttttaatgggaagagaattgtcagttgagtttttggaaaatgatatggat
gttgttcaaaatgtggataaatcgcatgttatccatggtgaaaagcctcctcacatggga
ttggaattacccgaggcaattgatccacctaagaaaccagaaggacttaaatttcttaaa
gagcctttggaacatggaccagcaatcatatatgtatccaccagaaaagaaacttcgaga
attgcaaagtatctatgcatgtttggtgtgaaggctgctgcttataatgcagggcttccc
aaattgaatctaagaagggttcataaagggtttcatgaaaatactttagaggttattgtt
gctacaatagcttttggaatgggtattgacaaatcaaatgtcagaagaatcattcactat
ggttggccacagagtttagaagcctactaccaagaagctggacgggctggtcgagatggg
aaattagcagattgcattctgtatgcaaacctagcaagcaagccgtcacttttgcctagt
cggaaaagtgaagaacagatgaaacaggcatatatcatgttgtctgattgtttcagatat
gtaatgaatacttcatgctgtcgagcaaagacattagttgaatactttggagaggatttc
agtcatcagaaatgtctcttatgtgacgtgtgcaccaatggtccgccacaacggctgaat
ctaaaagaagaggcctgtattttactacaaactgtaggtgcccataatgtatgtaatgat
cccttggattgctcatatgaagatgatatatattctggctccaaacatagaggactaaga
gagaggccaaaccttaaggtgttagttgtaaaaataaggcagcagtatcaaaagttttta
accactgatatattatggtggagaggtcttgctcgattattggaaattaaaggattcata
agggaaggagatgacaagatccatgttcaggtaaaatacccggagccaacagaattgggg
atggaatttgtgaagtctatgagtgagcaagatttctatgtctaccctgaggcagatatg
ttgcttacaaggaaaagtaacaaaccattttcctcattctcggaatggggaaggggttgg
gctgatcctgagatccgccgccagcgcttggaaaaaatgaatctcaataaaaagccaaag
atgctaccaagtcccaaaaacaaaaggcaacgaaggagaaaaggtaagaaatggcaatct
gatttgaggacttctcgtggtagactagtagcaaaactcacaaaatttaagtga
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