KEGG   Cajanus cajan (pigeon pea): 109795703
Entry
109795703         CDS       T04868                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109795703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109795703
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109795703
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     109795703
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109795703
NCBI-ProteinID: XP_020210803
LinkDB
Position
3:complement(27993263..27997341)
AA seq 241 aa
MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ
QISSHALVRCEYSMANFSAGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY
VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYGEDSAGGPD
VTLGILPKLDKVTLLQMDSKLPIDLLENVMQLAIEGCKAIANYIREILLENTNQLEYRRG
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaatacgtcagcccagaaggacttcgcttggatggtcgccgacccatggagatgcga
caaatccgtgcagagattggtgctgtatcaaaagcagatggttctgccatttttgagatg
ggtaatacaaaagttattgctgctgtttatggccctagagaggtgcaaaataggagccaa
caaattagtagccatgctctggttcggtgtgagtacagcatggctaattttagcgctgga
gatcgcatgaggaaacctaagggcgacaggagatcaactgaaatttctctggttattcgc
caaaccatggaagcgtgtatattgacacatttattgccgcgttcccagatagatatttat
gttcaagttctccaagcagatggaggaactagatctgcatgtataaatgctgcaactttg
gcccttgccgatgctgggatccctatgcgtgatcttgtaacttcctgtagtgctggatac
cttaatagcacccctctgctcgatttgaactacggagaagatagtgctggaggtcctgat
gtaactctaggaattctgccaaagctggataaagtgacacttctccagatggattctaaa
ctaccaattgaccttttggaaaatgtaatgcaactggcaattgaaggctgcaaagcaata
gcaaactacattagagaaattttactggagaacacaaatcaactcgagtatcgacgaggt
gtatag

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