Cajanus cajan (pigeon pea): 109795716 Help Entry 109795716         CDS       T04868                                  Name (RefSeq) phytochrome A isoform X1   KO K12120   phytochrome A Organism ccaj  Cajanus cajan (pigeon pea) Pathway ccaj04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:ccaj00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     109795716 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PHY PAS PAS_2 GAF HATPase_c PAS_9 PAS_4 HisKA PAS_10 Motif Other DBs NCBI-GeneID:  109795716 NCBI-ProteinID:  XP_020210820 LinkDB All DBs Position 3:complement(26417658..26424488) Genome browser AA seq 1130 aa AA seqDB search MSSSRPSQSSSNNSGRSSRHSARVIAQTTLDAKLHATFEESGSSFDYSNSVRLSPGTGTA SGDNQPRSDKVTTAYLHQIQKSKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVP SVGDHPALGIGTDIRTIFTAPSAAAIQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVT GSVIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSLETLCDTMVQEVFELTG YDRVMAYKFHDDDHGEVIAEVKRPGLEPYLGLHYPATDIPQVTRFLFMKNKVRMIVDCRA KHVKVLQDKKIPFDLTLCGSTLRAAHSCHLQYMENMKSSASLVMAVVVNDNDEDGDSGSD AVQPQKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELEIEYQIVEKNILR TQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIREIALWL SEFHRDSTGLSTDSLSDAGFPGAAALGDIACGMAAVRIASKDIVFWFRSRTAAEIRWGGA KHEPGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKETESMEI STYAINTRLGDLKIEGMQELEAVTSEMVRLIETATVPILAVDVNGMVNGWNTKIAELTGL PVEKAIGKHLLMLVEDFSVDRVKKMLDMALQGEEEKNVQFEIKTHDLKIDSGPISLVVNA CASRDLQDNVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWC CEWNSAMIKLTGWKREEVMDKMLLGEVFGTQIASCRLRNQEAVVNFSIVLNKAMAGLETE KVPFGFYTREGKYVECLLSVSKKLDAEGVVTGVFCFLQLASPELQQALHIQHLSEQTALK RLKDLTYLKRQIRNPLYGIIFTRKLLEGTELGAEQNQFLQTGTRCQHQLSKILDDSDLDS IIDGYLDLEMVEFTMHEVLVASLSQVMTKSNAKGIPVVNHVEDHITTETLYGDSLRLQQV LADFLSISIDFTPSGGQVVVAASLTKQQLGKLVHLAYLELSITHDGFGVPETLLNQMFGR DGNESEEGISMLISRKLLKLMNGDVRYIREAGKSSFILTVELAVAHNSRA NT seq 3393 nt NT seq  +upstreamnt  +downstreamnt atgtcctcctcaaggcctagccaatcatccagcaacaattctggcagatcatcaaggcac agtgctagggttattgctcagacaactttagatgcaaaactgcatgcaactttcgaggaa tcaggtagctcttttgactactccaattctgtgagattgtctcctggtacaggcactgcc agtggagacaatcaaccaaggtctgataaagtaacaactgcttatcttcatcagattcag aaaagcaagcttatccagccatttgggtgcttgctagcattagatgagaaaacatgtaag gtcattgcttacagtgagaatgcacctgaaatgctcactatggttagtcatgctgtgcca agtgttggagaccaccctgcccttggcattggcactgacataagaactattttcactgcc ccaagtgctgcagctattcagaaggcactaggttttggagaggtttcacttcttaacccc attctagtccattgcaagacctctgggaagcccttttatgcaattgtccatcgtgttacc ggaagcgttatcattgattttgagcctgtcaagcctcatgaagttcccatgactgcagca ggtgccctgcaatcctacaagcttgcagcaaaagcaataactaggttgcaatctttgcct agtgggagcttggaaacactgtgtgacacaatggttcaagaagtttttgaactcacaggc tatgacagggtaatggcttataaatttcatgatgatgatcacggtgaagtgattgctgag gtgaaaaggccaggcctagagccatatctggggttgcactacccagccactgatattccc caagttacacgctttttgtttatgaagaataaggtgcgtatgatagttgattgtcgtgca aagcatgttaaggtgcttcaggacaaaaagattccatttgatttaaccttgtgtggatca accttgagggctgctcacagttgccacttgcaatacatggagaatatgaaatctagtgct tccttggttatggcagttgtggtcaatgacaatgatgaagatggggatagtggctctgat gctgttcagccacagaagagaaagagactctggggtttagtggtttgccatcacactact cccaggtttgttcctttccctcttaggtatgcttgtgaattcctggctcaagtatttgcc atccatgtgaacaaagaacttgagatagagtatcagattgttgagaagaacatcctgagg actcaaacactcttgtgtgacatgctgatgcgagatgcgcccctaggcatagtgtcacag agtcctaacataatggatcttgttaagtgtgatggagcagccttgttgtacaaaaacaag gtatggagattaggggtaacaccaagtgaatctcagataagagagatagcattgtggctc tctgagttccatagggattccacaggtttgagtacagatagcttgtctgatgcaggcttc ccaggggctgctgcacttggtgatattgcttgtggaatggcagctgtcagaatagcttcc aaagatatagtgttctggtttcggtctcgcactgcggctgaaatccgatggggtggtgca aagcatgagcctggtgaaaaggatgatggtaggaggatgcatccaagatcatcattcaag gctttccttgaagttgtgaagactaggagcttgccctggaaggactatgaaatggatgcc attcattcattgcagttaattttgagaaatgcattcaaagagacagagagtatggagata agcacatatgctatcaatacaagactaggtgatttgaagattgaagggatgcaagagctg gaagcagtgacaagtgagatggtgaggttaattgaaacagcaacggtgccaattctggca gttgatgttaatgggatggtcaatggatggaatacaaaaattgctgagttgacaggtctt ccagttgagaaagctattgggaagcatttactcatgcttgttgaggatttttctgtagat agagtcaagaagatgttggacatggcactccagggtgaggaagagaaaaatgtccaattt gagatcaaaacacatgacttgaagattgattctggtcctataagcttggtcgttaatgct tgtgcaagcagggatcttcaagacaatgttgtgggtgtttgtttcgtggcacaagatata actgctcagaagacagtgatggacaaattcacccgaattgaaggtgattacaaggcaatt gtacagaatccaaatccattgatccctccaatatttggtacagatgaatttggctggtgt tgtgaatggaactcagctatgataaaattaactggatggaaacgagaagaggtgatggat aaaatgcttttaggagaggtttttgggacccaaatagcttcttgtcgtctaaggaaccaa gaagctgttgttaattttagcattgtacttaacaaagccatggctggtttggaaacagag aaggttccctttggtttctatactcgtgaggggaagtatgtagaatgtcttctttctgtg agtaagaaattggatgcagagggcgtagttactggggtattctgcttcttgcaattagct agtccagaactgcaacaggcgttacacattcagcacctatctgaacaaactgcattgaag agactgaaagatttaacttatttgaagaggcaaatccggaatcctctatatgggattata ttcacccgaaaattgttagagggtactgagttgggagctgaacaaaatcaatttctgcaa acgggcactaggtgtcaacaccagctcagtaaaattctggatgactcagatcttgacagc atcattgatggttacctggatttggagatggttgaatttactatgcatgaagttttggtt gcctccctaagtcaagtgatgacaaagagtaatgcaaagggtatccctgtagtcaaccat gttgaagatcatattacaacagaaaccttatatggtgatagtctcaggcttcagcaggtc ttagctgactttttatcgatttccatcgatttcacaccaagcggaggtcaggttgttgta gcagcctcattaaccaaacagcagttagggaaactagtccatctcgcttatttggaactc agcataacacatgatggttttggggttccagaaacattgctgaaccagatgtttggacgt gatggaaatgaatctgaagagggtattagcatgctgattagcagaaaactgctaaagctg atgaatggagacgtacgttatataagagaagcgggaaaatcatctttcatcttaactgtt gaacttgccgtagcccataattccagggcttga

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