Cajanus cajan (pigeon pea): 109796092
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Entry
109796092 CDS
T04868
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109796092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109796092
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109796092
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
109796092
NCBI-ProteinID:
XP_020211308
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All DBs
Position
3:complement(25698968..25704564)
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AA seq
587 aa
AA seq
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MLQRMAYTFSFPEEVLEHVFSFIESEKDRNAISLVCKSWYEIERWCRRRVFVGNCYAVSP
MMVIKRFPEVRSIALKGKPHFADFNLVPEGWGGYVCPWIAAMACAFPWLEEIRLKRMVIT
DESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSH
FPDSYTSLVSLNISCLGNEVSLSSLERLLGRCPNLQTLRLNRAVPLDRLPNLLRRCPQLV
ELGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSY
AIVQSSDLIKLISQCPSLLRLWVLDYIEDAGLYALAASCKDLRELRVFPSDPFGLEPNVA
LTEQGLVSVSEGCPKLQSVLYFCRQMSNAALNTIARNRPNLTRFRLCIIEPRTPDYITLE
PLDSGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLS
GCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVI
DERGPPDSRPESCPVEKLYIYRTIAGPRLDMPGFVWTMEDDSSLGLE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagaatggcgtacacgttctcgttcccggaggaggtgctggagcacgtgttc
tcgttcatcgagagcgagaaggaccggaacgcgatctcgctggtgtgcaagtcgtggtac
gagatcgagcggtggtgcaggaggagggttttcgtggggaactgctacgctgtgagccct
atgatggtgatcaagcggttcccggaggtgagatccattgcgctcaaagggaagccgcac
tttgcggacttcaatttggttcccgagggttggggcggttacgtttgcccctggatcgct
gccatggcttgcgcctttccgtggctcgaggagatcagactcaagaggatggtcatcacc
gacgagagccttgagctcatcgccaagtccttcaagaacttcaaggtgctcgttctcact
tcgtgtgagggtttcaccactgatggacttgccgccattgctgctaactgcaggaatttg
agggagctggacttgcaggagagtgaagtggaggaccttagtgggcactggctgagccat
tttcctgattcctacacatcattagtttcacttaacatctcttgcttaggcaatgaggtg
agtttatcttcactagagcgactacttgggaggtgtcccaacctgcagaccctccgtctc
aaccgtgctgtgccccttgatagactacccaacttacttcgccggtgtcctcagctggtt
gagttaggcacaggagtctactcaactgagatgcgaccggaggtcttctcaaatcttgag
gcagcattttctgggtgcaagcagttgaagagcttgtctggcttttgggatgtgctccca
tcgtaccttccagctgtttatcccatctgctccaggctaacatcgctaaacttgagttat
gctattgttcaaagctctgatcttattaagctcatcagtcaatgcccgagtttgttgcgg
ttatgggtgctggattacatagaagatgctggtctttatgcccttgctgcatcatgcaag
gatctaagggagttaagggtgtttccgtctgacccatttggtttagaaccgaatgttgca
ttgacagaacagggccttgtgtctgtgtctgaaggttgccccaagctccagtcagttcta
tatttttgtcgtcaaatgtctaatgcagcactaaatacaattgcgcggaacaggcctaat
ttgactcgttttcggctttgtattattgaacctcgaactcctgattatattacccttgaa
ccgctggattctggttttggagctattgtagagcactgcaaggatcttcaacgcctatcc
ctatctggtcttcttaccgatcgtgtttttgagtatatcgggacttatgggaagaagctg
gagatgctatccgtggcttttgctggagatagtgatttgggacttcatcatgtgctgtct
gggtgtgataatcttaggaagctggagatcagggactgcccctttggtgacaaggccctt
ttggccaatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgctcagtg
agttatggagcatgtaagctactgggtcagaaaatgcccagactcaacgttgaagtcatt
gatgaaagaggacctccagattcaaggccagagagttgtcctgttgagaagctttatata
tacaggactattgctgggccaaggttggacatgcctggttttgtgtggacaatggaagat
gattcttcactagggcttgagtga
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