Cajanus cajan (pigeon pea): 109796196
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Entry
109796196 CDS
T04868
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109796196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109796196
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109796196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Motif
Other DBs
NCBI-GeneID:
109796196
NCBI-ProteinID:
XP_020211460
LinkDB
All DBs
Position
1:1538827..1542855
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AA seq
380 aa
AA seq
DB search
MFGSAQPSSPFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTPAFGASSTPAF
GSSLFSTPFSSQPQQQQQTPLFQQQQQPQPSNAFGFQNSLAPPQPSPFSNAQLTTQMANV
APVPFSLADRDVQAILDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGK
LEGMESADRERLWPQLAQGFKDLSQRLKIQDEVIVSDAERLRVTQSNVKMLQRHFQADTL
PWIQRLKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGSE
LSRRVQNLLTVSRGKANSNGFGGSVYLPGSTKIHEQSLTDLQEVLQQQMEAIGRLGGVLK
RDIRDMEIMMHEDTGMEMGI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctctgcgcaaccttcttctcctttcggcactccctcttcaacccccgcattc
ggcacaccttcttccacacctgcgttcggtacaccttccttcgctacaccttcttccaca
ccagcgttcggtacaccgtcttctacacctgcgttcggtgcttcttctacaccagcgttc
ggttcctccctcttctccacacccttctcttctcaaccgcaacaacagcaacaaacgcca
ctctttcaacaacaacaacagccacaaccttctaacgctttcggttttcaaaactccctc
gcgccgccgcaaccctctccgttctcaaatgctcaattaaccactcagatggccaacgtg
gcacctgttccgttctctctcgcggatcgcgatgttcaggctatccttgatgcttacaag
gaagatcctggaaaccccaagtacgcttttaagcatttgttgttcagtgtaacagaaccg
cagtttagagtgaagcctgctggtgtgtcagacatcatgtgggcagaggcgatgggtaag
cttgagggtatggaaagtgctgacagagaacgtctgtggccacaacttgctcagggtttt
aaggatctttcacaacgtcttaagatacaagatgaagtcattgtttctgatgcagagaga
ttacgtgtaacccaaagcaatgttaaaatgctccagagacattttcaagctgatactctt
ccgtggattcaaaggctgaaacaaaaagaacaaattctacagcaacgtcttttaagagta
atgagaatagtagaggctttggagggaaaaggctgccgtatacccttaacaaaaggggaa
gctgaacttgctgagaaattagcgacaataaccagacagctgaaaggatctggatcggaa
ttgtctagaagggtacaaaatctactaactgtatctcgtggtaaagcgaacagcaatgga
tttggtggctccgtttatcttccggggtcaaccaaaattcatgaacagagtcttactgac
ctacaggaggttttacagcagcagatggaggccattggaagacttggcggtgttctgaag
cgagatatacgggatatggagattatgatgcatgaggacacaggaatggaaatgggaatt
taa
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