Cajanus cajan (pigeon pea): 109796240
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Entry
109796240 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109796240
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109796240
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
109796240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109796240
NCBI-ProteinID:
XP_020211514
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All DBs
Position
1:15908551..15920398
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AA seq
797 aa
AA seq
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MEASAAQRKPKRKRVAAASDPEFERLNSLPWNSALPQHDDDDAFSMFMGSNELEGGFLSL
EEIDEAAYGLNIPEPGVDKRKKSKQNENVKERQEDGVDGACRDEVEAELDESVKSKEKKK
KKKKKKKKDAKEGQKVEQTDAGLDTNVKDDIGEEDIDETEFYAWNDLRLHPLLMKAICKL
GFKEPSPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREKAANMVEESD
EEPEKYAPTGFLRALIIAPTRELALQVTDHLKAVAKYINIRVTPIVGGILAEKQERLLKA
KPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSN
ISTEDNSQNVQSCVTVSSYQRKKRQTLVFSATVALSADFRKKLKRGSIQQKQPLADGLNS
IETLSERAGMRSNAAIIDLTNPSILAAKLEESFIECREEDKDAHLYYILTVHGQGRTIVF
CTSIAALRHISSILRILGINVWTLHAQMQQRARLKAMDRFRENENGILVATDVAARGLDI
PGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPRDTSKFASLCKSFSKDTFQR
FPLENSFMPEVLKRLSLARQIDKITRKDSQEKAEKNWFDRNATSVELVTENYDSEEEQVN
KHKKKKASSRQLKKLQEELKMLISRPLQSKTFSHRYLAGAGVTPLMQEQLQQLARQKLSD
QLGSGLGKKGRLVVIGQDCVEALQALRSAGEEVRMDVKNLAGKQRNVENLKRKRKEEKKR
LHDQRRKQKRKLKHGDE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcagcagctcagagaaagccgaagaggaagcgagttgcagcagcaagcgac
cctgaattcgaacgtctcaactcacttccgtggaactccgcacttcctcaacacgatgac
gacgacgctttctccatgttcatgggctccaatgaactcgaaggaggttttctttcgctc
gaggagattgatgaggctgcgtatggtttgaatattcctgaacctggagttgacaagagg
aagaagtctaaacagaacgaaaatgtgaaggagcggcaggaagatggagttgatggtgct
tgtagggacgaggttgaagcagaattggatgagagcgtgaagtctaaagagaagaaaaag
aagaagaagaagaagaaaaagaaggatgctaaagaagggcagaaagttgagcagacagat
gctggtttggatactaatgtgaaggatgatattggggaggaggacattgatgaaactgaa
ttttatgcatggaatgatttgaggcttcatcctctcctaatgaaagcaatatgcaagctt
ggcttcaaggaaccatcaccgatacagaaggcttgtattccagctgctgctcatcaaggg
aaggatgttgttggggctgcagaaacgggatctggtaaaacacttgcttttggtttgccc
attttgcaacggcttttggaggagagggagaaggctgcaaatatggttgaagaaagtgat
gaagaacctgaaaagtatgctcctacaggctttttgagggctcttattattgctccgaca
agagaacttgcacttcaggtcactgatcatcttaaagcagttgccaagtatattaatatt
agggtgacccctatagttggggggattttagcagaaaagcaggagagacttttaaaagca
aagccagagattgtcgttgggactccaggaaggttatgggaacttatgtcagctggagaa
aaacatctagttgagttacattcactgtctttctttgtgcttgatgaggctgatcggatg
gtacaaaatggacattttaaggagttgcagtcaataattgatatgcttcccatgtccaac
atctctactgaagataattctcaaaatgtacaaagttgtgttacagtttctagttaccaa
agaaagaaaaggcaaactcttgttttttcagcaactgttgcactgtctgctgattttcgc
aagaagctaaaacgtggctcaattcaacaaaagcaaccattggcagatggattgaattct
atcgaaactctttctgagcgtgcaggaatgagatccaatgctgcaataattgatcttact
aatccgtctatattagcagctaagcttgaggagtcatttattgaatgcagagaagaagat
aaagatgcccatttgtattatattttgactgtccatggacaaggccgcacaatagttttc
tgtacgtcaattgcagctttacgccatatttcttccatactgcgcattcttggcatcaat
gtttggactcttcacgcccaaatgcagcagcgtgcacgtttaaaggccatggatcgcttt
cgtgaaaatgaaaatggcatacttgttgctacagatgttgctgcaaggggtcttgatatt
cccggtgttagaactgttgtacactatcagcttccacattcagcagaggtttatgttcat
agaagtggaagaacagccagagcttctgcagaaggttgtagtattgctttaatatcaccg
agagatacatcaaagtttgcttcattgtgcaagtcattttctaaggatacctttcagcgg
tttcctctagagaactctttcatgccagaggtcctaaaacgattgtctcttgcacgtcaa
atagacaagataacaaggaaggattcccaggaaaaggctgagaaaaactggtttgatcgg
aatgctacctcagtggaattagttacagaaaattatgacagtgaagaggaacaagtgaac
aaacataagaaaaagaaggccagctctagacaattgaagaaattgcaagaggagctcaag
atgctgatttcacgtccattacaatcaaaaacattttcgcatcggtatttagcaggggct
ggtgtcacacccctcatgcaggagcagttgcagcaattagcaaggcaaaaactaagtgat
caactgggttcaggactaggtaaaaagggaagattagttgtgattggtcaagattgtgtg
gaagcacttcaggcacttagaagtgctggtgaagaggtgcgaatggatgtcaagaatttg
gcaggaaaacagagaaatgtggagaatctaaaaagaaagcgaaaagaggagaagaaacgt
ttgcatgatcagcgtagaaagcagaagagaaagctaaagcacggtgatgaatag
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