Cajanus cajan (pigeon pea): 109796573
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Entry
109796573 CDS
T04868
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109796573
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
General mRNP proteins
109796573
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
109796573
NCBI-ProteinID:
XP_020211829
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Position
3:complement(816483..824671)
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AA seq
581 aa
AA seq
DB search
MDFDEYEYLENAVEKPQVKKEKHRANGGDKTVKSEERGHGGNSKHKDYDDVGLRSKHSKS
GEDSREYERQRERGSSRHGSQSREGEKERDQHRRKRDRDRDHEDKDRKRDNRDQERDRRD
RGSETERERRSRSRPERHRGDVDDRDYGDRERSRDKEYKDRERVRESREQDRETRRHKEK
KDEAKEPEADPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG
YIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTSSVATGPTGLIGPYSGGAR
RLYVGNLHISIGEADLRGVFEAFGQVELVQLPLDESGQCKGFGFVQFARLEDARNAQSLN
GQLEIGGRTIKVSAVTDQSGMQEVGGNTGDFDDDEGGGLSLNACSRALLMQKLDRSGSAS
SMVGSLGNSVVNNVGLNLPASGTIPATASVGSPLVSPVAPVAGLAGGSLQIPTATIPSID
TIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAESSKFGTLKHIYVDKMSAGFVYLRF
EDTQSAISAQRALHGRWFAGKMITASFMVPQSYEEKFPDSR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtacgagtatttagagaacgcagttgaaaagcctcaagttaagaag
gagaagcacagggccaatggtggtgacaaaactgtgaagtccgaagagagggggcatggt
gggaattccaagcataaggattatgatgatgttggtctccgttccaagcattcaaaatcc
ggagaggattctcgtgaatatgagaggcagagagaaagaggttcctctcgccacggttcg
cagtccagagagggagagaaggagagggatcagcacagaaggaagagggacagggacaga
gatcatgaggacaaggataggaagagagacaaccgtgaccaagaaagggacaggagggac
cgtgggagcgagactgaacgggaacggcgaagcagaagtagacccgaaaggcatcggggt
gatgtggatgacagggactatggagatagggaaagaagccgggataaggagtacaaagac
agagaaagggtgagggaatcaagggaacaggatagagaaaccagacgacataaagaaaaa
aaggatgaagcaaaagaacctgaggctgatcctgaaagagatcaaagaactgtgtttgct
tatcagatttctctgaaagcagatgaaagagatgtatacgagttcttctcaagggctggc
aaggtgcgagatgttcgcctgattatggaccgcaattcaagacgttctaagggtgttggg
tatattgagttttatgatgtcatgtctgtccccatggctatagcactttcgggccaacct
cttcttggtcagccagtgatggtgaagccatcagaagcagaaaagaatttggttcagtcc
acatcatctgttgctactggacccactggacttataggcccttattctgggggtgcgaga
aggctgtatgtaggcaatctgcatatcagtattggtgaagctgatcttcgtggggtgttt
gaggcatttggtcaggttgagctagtccaactgcctcttgatgaaagtgggcaatgcaaa
ggttttggctttgtgcagtttgcacgccttgaagatgcaagaaatgctcagagcttgaat
ggtcaattagagattggtggtaggacaatcaaggtatcggctgttactgatcaatctgga
atgcaagaagttggaggaaatactggtgattttgatgatgatgaaggaggtggcttgtcc
ttgaatgcatgttctcgagcattactcatgcagaagttggatcgaagtggcagtgcatca
agcatggttggttccctcggtaattctgttgtcaacaacgttggtcttaatctaccagca
tccggaaccatacctgcaactgcatctgtgggttctccactggtttctcctgttgcacca
gtagctgggttggcaggtggaagtctccaaattcctacggctacaattccatccattgat
acgattggcgttccaagtgaatgcttaatgttaaagaatatgtttgatcccaaagatgag
actgaaccagattttgatttggatattaaagaagatgttgaagcagagagctctaaattt
gggacgttgaagcacatatatgttgataagatgagtgctggttttgtctacttacgattt
gaagatacccaatctgcaataagtgcacaacgggccttgcacggaagatggtttgctgga
aagatgatcactgcaagcttcatggtgcctcagtcatatgaggagaaattcccagatagc
agataa
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