Cajanus cajan (pigeon pea): 109796655
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Entry
109796655 CDS
T04868
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109796655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109796655
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109796655
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
LRR_6
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
109796655
NCBI-ProteinID:
XP_020211983
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Position
3:complement(24407008..24410176)
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AA seq
584 aa
AA seq
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MPRLAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIEAWCRRRVFVGNCYAVSPATV
VKRFPKVRSVAIKGKPHFADFNLVPEGWGAYVFPWIKAMAAAYPWLQEIRLKRMVITDEC
LELIAKSFKNFSVLVLTSCEGFTTDGLAAITANCRNLRELELRESEVEDICGHWLSHFPD
SYTSLVSLNISCLGNEVNLSALERLVSRCTNLQTLRLNRAVPLEKLANLLRGAPQLVELG
TGTYSTEMRPEVFANLAEAFSGCKQLKSLSGFWDVLPSYLPALYPVCSSLTSLNLSYATI
QSSDLIKLVSQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTE
QGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARNRPNMTRFRLCIIEPRAPDYLTREPLD
AGFGAIVEHCKDLRRLSLSGLLSDRVFEYIGTYGKKLEMLSVAFAGDTDLGLHHVLSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGLKLPRLNVEVIDER
GPPDSRPDSSPVEKLYIYRTVSGPRLDMPGYVWRMEDDSALRVS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactagcctactccttccctgaggaggtgctggagcacgtgttctccttcatc
gagtgcgacaaggaccgcggctccatctccctcgtctgcaagtcctggtacgagatcgag
gcctggtgccgccgcagggtctttgtcgggaactgctacgcggtgagtccggccaccgtg
gtcaagcgcttccccaaggtgagatccgtggccatcaagggcaagccgcacttcgctgac
ttcaatttggtccccgagggttggggcgcctacgtcttcccttggatcaaggccatggct
gctgcctacccttggcttcaggagatcaggctcaagaggatggtcatcaccgacgagtgc
ttggaactcatcgccaaatccttcaagaacttctccgtcctcgtcctcacctcttgcgag
ggtttcactaccgatggactcgctgccattaccgccaattgcaggaacttgagggagttg
gagttgcgggagagtgaagtggaggacatttgtgggcattggctaagccattttcctgat
tcgtacacgtcgttggtttcccttaacatttcttgcttaggcaatgaggtgaatttgtct
gccctagagcgtctggttagtaggtgtaccaacctgcagactctccgcctcaaccgtgca
gtgccccttgagaagctagccaaccttcttcgcggtgctcctcagctcgttgagttgggc
accggaacctactcgacggagatgcgaccggaggtctttgcaaacttagcagaagcattt
tctgggtgcaagcaattgaagagcttgtctggattctgggacgtgctcccatcctacctt
ccggctctttatcctgtctgctccagcctcacgtcattaaacttgagttatgcaactatt
caaagctctgaccttatcaagcttgttagtcaatgtgagagtttgcagcgtttatgggtg
ctggattacatagaagatgctggacttgaagtgattgctgcatcgtgtaaggatctgagg
gagttgagggtctttccctctgacccatttgggttagaaccaaatgttgcgttgacagag
cagggacttgtttctgtctctgaaggctgcaccaagcttcagtcagttctatatttttgt
cgtcaaatgtcgaatgctgccttggatacaattgctaggaacagacctaatatgactcgt
tttaggctctgtattattgagcctcgagctcctgactatcttacccgtgaacctctggat
gctggttttggagctattgtagagcattgcaaggatcttcggcgcctttccctttctggg
ctcctttcggatcgagtttttgagtatattgggacttatggtaagaagcttgagatgctt
tctgtggcttttgctggagacactgatttgggactccatcatgtgctgtctgggtgtgac
aaccttaggaagctggagatcagggactgcccctttggtgacaaagcccttttggcgaat
gctgcaaagctggagacaatgcgatccctttggatgtcctcttgcttggtgagttacgga
gcgtgtaaactgctgggtctgaaactgccgagacttaatgttgaagtcattgatgaaaga
ggacctccagattcaaggccagatagtagtcctgttgagaagctatacatatacaggacc
gtttctgggccaagattggacatgccaggctatgtatggagaatggaagacgattctgca
ttaagggtttcttga
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