Cajanus cajan (pigeon pea): 109796798
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Entry
109796798 CDS
T04868
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109796798
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109796798
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
109796798
NCBI-ProteinID:
XP_020212189
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Position
3:complement(540769..547064)
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AA seq
559 aa
AA seq
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MAASSSSASLFGFREEDQNQMKQQHSLTPPSSTPPAAPPPQKKKRNQPGTPYPDAEVIAL
SPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCV
HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALAQESARQPPNLGGGIGNHLFGTTNMALNLSQVGSQISNMQDP
STQQTELLRLGGATGRTGQFDHILGSPFRPSQQPFFMSEPNQNYHPEQQGLVPNKPFQQG
LMQLSDHISNNHHNSMTSSPFNLPFLTNNTTNTIPEHFNSANGGGNNNNEGTNFFTTSSV
PSLFSNSNTNNSGNAIAHMSATALLQKAAQMGATSSNSTASLLKSFGSASSSSGSKSEHR
PLVAAANYGGIFGGNVNVNEQSNSNLQDLMNSFAVGGNSSIFEGGSSGGFSVAGFEAYDH
GNNKDPKVHAMSSSSIGGSDRLTRDFLGVGQIVRSMSGNGGVPQREHGFNLSSLEAERNN
NNNTAPSGQSFGGGGGNFQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcatcttcctcagcatcgctttttggatttagagaagaggatcagaaccag
atgaagcaacagcattccttgaccccaccttcatcaacacctccagctgcaccaccaccc
cagaagaaaaagagaaaccaaccaggaacaccatatccagatgcggaggtgatagcacta
tctcccaagaccctaatggcaacaaacaggtttatatgtgaggtgtgcaacaaagggttc
caaagggagcaaaatctacagctacacagaagaggacacaacctgccttggaagcttaag
cagaagactacaaaagagccaaagagaaaggtttatctgtgtcctgagcccacatgcgtc
caccatgacccttcaagggctcttggagacctcacagggattaagaaacactactctcgc
aaacatggtgagaagaagtggaagtgtgacaagtgctctaagaagtatgctgttcaatcc
gattggaaagcccattctaagacttgtggcaccagagaatacagatgtgactgtggcacc
ctcttctccaggagagacagtttcatcacccacagggcattctgcgatgcactggctcaa
gagagtgcaagacaacccccaaaccttggtggtggcattggaaaccacttattcggaacc
accaacatggccttaaacctatctcaggtgggttctcagatctcaaacatgcaagaccct
agtactcagcaaaccgaactacttcgcctaggcggcgccaccggtcgaaccggtcaattc
gaccacatcctcggttcacccttcagaccctcacagcaaccttttttcatgtccgaaccg
aaccaaaactaccacccagaacaacaaggtttggtcccaaacaaaccgttccaacaaggg
ttaatgcagttatctgaccacatcagcaacaaccaccacaacagcatgaccagttctcct
ttcaaccttcccttcctcacaaacaacaccaccaacaccattcctgagcacttcaatagt
gcaaatggaggtggcaacaacaacaatgagggcacaaacttcttcacaacttcgagtgtt
ccttctctcttcagcaacagcaacaccaacaacagtggcaatgccatcgctcacatgtcc
gcaactgcactgcttcagaaagctgctcaaatgggtgcaacttcaagcaacagcaccgct
tctttgttgaaaagcttcggaagtgcttcttccagcagtggttcgaaatctgaacacagg
ccactggttgctgctgccaactatggtggaattttcggagggaacgtgaacgtaaatgaa
cagagtaatagtaaccttcaagacctaatgaactcgttcgctgttggtggaaattcttcc
attttcgaaggtggttcttcaggagggttttctgtcgcgggatttgaagcatatgatcat
ggcaacaataaagacccgaaagtgcatgcaatgagtagtagtagcattggaggatctgat
agactcacccgcgattttctgggagtgggtcagatagtgagaagcatgagtgggaatgga
ggggttccgcagagagaacatggcttcaacttgagttctttggaggcagaaagaaataat
aataataatactgcgccgtcaggtcaatcttttggaggtggtggggggaattttcagtga
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