Cajanus cajan (pigeon pea): 109796830
Help
Entry
109796830 CDS
T04868
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109796830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
IG_AIR9
Motif
Other DBs
NCBI-GeneID:
109796830
NCBI-ProteinID:
XP_020212235
LinkDB
All DBs
Position
3:6680291..6684431
Genome browser
AA seq
699 aa
AA seq
DB search
MITFMDTKEKSKEVERCLDPQLWHACAGGMVQMPAVNTKVYYFPQGHAEHACAPVNFRSC
PKVPPFVPCRVAAIKYMADPETDEVYAKLRLVPLNATEADYDRDVVGAETQDKPASFAKT
LTQSDANNGGGFSVPRYCAETIFPRLDYSIEPPVQTILAKDVHGETWKFRHIYRGTPRRH
LLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGPEAPSGWNPAGGNCP
VPYGGFSAFLREDDNRILRNGNSNGLNPSVSMIGRGKVRPEAVIEAANLAANKQPFEVVY
YPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNW
PNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHLSPFSPPRKKLRLPQHPDFPL
DGQIPLPTFPGNLLGPSNTNQFGCLPESTPAGMQGARHAHYGISLSDLHLNKLQSGLFPA
GFPPLDHAATPMRVSNNPTLPKPSMSENVSCLLSMANSTQSPKKLDDGKTPHLMLFGQKI
LTEQQISLSSSGDTLSPVLTRNCSSDGNADKVANFSDGSGSALHHQGQHERSSCERFQWY
RDNHQESEANLETGHCKVFMESEDVGRTMDLSLLQSYDDLNRKLADMFSIEKSQMLSQVL
YRDKTGAVKHIGDEPFSDFTRTARRLTILMDSGSNNVGV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgattacattcatggacacaaaagagaaatcaaaggaggtggagaggtgtttggatcct
cagctatggcatgcgtgtgcaggtggtatggtgcagatgcctgcagtgaacactaaggtg
tattacttccctcaggggcatgctgagcatgcatgtgcaccagttaacttcaggtcttgc
cctaaggttccacctttcgttccatgcagagtggctgcaatcaaatacatggctgatcct
gagactgatgaggtctatgccaagctcaggcttgttcctctgaatgccactgaggctgat
tatgaccgtgatgttgttggggctgaaacccaggacaagcctgcttcatttgcaaagacc
ttgacccagtctgatgccaacaatggtggggggttttctgttcctaggtattgtgctgag
acaattttcccccggttggactactcgatcgagcctccggttcagaccatccttgccaag
gatgttcatggggaaacatggaaattcagacacatctataggggcacgccgcggcggcac
ctgttgaccactgggtggagtacttttgtgaatcacaaaaagcttgttgcaggggactca
attgtgttcttgagggccgaaaatggagatctttgtgtcgggatccggcgagcaaagaag
gggattggtggaggacctgaggctccctcagggtggaaccctgctggtggaaattgtcct
gtgccctatggtggattttcagcgtttctgagggaagatgataacagaattctgaggaat
ggtaacagcaatgggttgaacccaagtgtgagtatgataggcaggggaaaagtgaggcca
gaagcggttattgaagctgcaaatcttgcagccaataagcaaccctttgaggttgtttac
taccctcgggcaagtacaccggagttttgtgtgaaggcttcactagttgaagcagcactg
cagattaggtggtgttctggaataaggttcaagatggcctttgaaacggaggactcctcg
cgtattagttggtttatgggaacgatatcttcagttcaggttgctgatccccttaattgg
cctaattcaccttggaggcttctccaggttacatgggatgaaccagatttacttcaaaat
gtgagaagggtgagcccatggctggttgaattggtgtcaaacatgcctgccattcatctt
tctcctttctcaccaccccggaagaaattgagattgcctcaacacccggacttcccgctt
gatggccagattcctttgccaacatttcccggcaaccttctaggtcccagcaacaccaac
cagtttggatgtttacccgaaagtactcctgctggcatgcagggagccaggcatgctcac
tacggtatatccttatcggatctccacctcaataaactgcagtcaggtctatttccggct
ggtttcccgccccttgatcatgctgctacaccaatgagggtctcaaacaacccaacattg
ccaaagcccagcatgagtgagaacgtctcttgcttactatctatggcaaattctactcag
tctccaaagaaattggatgatgggaagacaccccatctcatgcttttcggccaaaaaatt
ctcaccgagcagcagatctctctaagcagctctggcgatacactctccccagttcttacc
agaaattgttcatcagatggaaatgctgataaagtggctaatttttccgatggttctgga
tcagctcttcatcaccaaggccaacacgaacgctcctcttgcgagaggttccagtggtat
agggataaccaccaagaaagcgaggccaacttggagactggtcactgtaaagtttttatg
gaatcagaagatgttggtcggactatggacctttcgttgcttcagtcttatgatgatcta
aacagaaagctggcagacatgtttagcatagagaagtctcagatgttgagtcaggtacta
taccgcgataaaactggagcagtcaaacacattggtgacgaaccattcagtgacttcaca
agaacagcaaggaggctgactattctaatggattctggcagcaataatgtaggagtgtag
DBGET
integrated database retrieval system
