Cajanus cajan (pigeon pea): 109796867
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Entry
109796867 CDS
T04868
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109796867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccaj03032
]
109796867
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109796867
DNA replication proteins [BR:
ccaj03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
109796867
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
109796867
BRCA1-C complex
109796867
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
109796867
NCBI-ProteinID:
XP_020212286
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All DBs
Position
3:complement(25149175..25159361)
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AA seq
552 aa
AA seq
DB search
MVWGLFPVDPLSGEEKYYIFKKGVYKVGRKGCDVIITKDKGVSRVHAEIVVNTMNPANRL
PNERSHLSSSIHIRDCSKYGTFISKNVGSKKKVHELPNKETVLEDGDLVSFGTGTATYKF
CHVPLIFFICSSNKVDQSLEEKISSIGASIIHTLGEECTHVLVDQLMPLKKDLVGAVVAK
KSCVLKTWLEIFAEKNISTEIPSCHSYIPSVSAGGESIKIADPRMREDCLKGYTFLLESE
HLYRFGNQLKSLLEVAGAKVVSFEVFCSNSQGSDYAEDNRVVCVIPGGGSSYKSDLFNKQ
SSLLRVDEMDVICAAFSGQLDLSILKSPCILVSSSCSTDETIVPDSETEVETATSAHSNE
AFSNHNNVKYEKTEELYDDSDTLDKRKHERVEASCDDVSTRLHEIKSAKTETSLDGASVR
SHDTSFGNNDGIRVKKDKADDYESGNSDIVYGQHLVVRDTNLHTSTSTAPNSNVPNFKRF
RKAETQSGNSFDNLVPFAKYPYKDSDCGNDETAELVKEEKRRKKMEAVADELFNNHKTKK
RGTVGSLRGILT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggactcttccccgttgatcctctttcaggtgaagaaaagtactacattttc
aaaaagggagtttacaaagttggtcgaaaaggttgtgatgtgataattactaaagataaa
ggggtttctcgggttcacgcagaaatagttgttaatacgatgaacccagcaaatcgttta
ccaaatgaacgttctcatttgtcatccagtatacatattagagattgctccaagtacggg
acatttattagcaagaatgttgggtccaagaaaaaagttcatgagctaccaaacaaagaa
acagtattagaggatggtgaccttgtttcttttggcaccggtactgctacctacaagttt
tgccatgtccccctcatttttttcatctgttcctcaaataaagtggatcaatctcttgaa
gagaaaatttcatcaattggtgctagtattattcataccttaggtgaagagtgcacacat
gttctggtagatcaactaatgccattgaagaaggatcttgtcggtgctgttgtggcaaaa
aaatcttgtgtactcaaaacttggcttgagatttttgcagaaaagaacattagcactgaa
attcctagctgtcattcatatattccctcagtgtcagctggaggagaatctattaaaatt
gctgaccccagaatgcgtgaagactgcttgaaaggatacacttttttgttggaatctgag
catttgtatagatttgggaatcagctaaaatctttattagaagtggctggtgcaaaagtt
gtttcctttgaagttttttgttcaaatagccaaggttcagattatgcagaggataatcgt
gtggtttgtgtcatccctggaggaggatcatcatacaagtctgatctcttcaataaacaa
agttccttgcttagagtggatgagatggatgtaatatgtgccgctttcagtggacagtta
gatctgtctattctgaaatcaccatgcatacttgtttcatcatcttgctctacagatgag
acgattgtaccagattcggaaactgaagttgaaacagccacatccgcccactcaaatgag
gcatttagcaaccacaataatgtaaaatatgaaaaaacagaagaattatatgatgattct
gacactttagataagagaaaacatgagagagtagaggcatcctgcgatgatgtttcgacc
agattgcatgaaattaaaagtgcaaaaacagaaacatccttggatggtgcttctgtcaga
tcacatgataccagcttcgggaataatgatggtattagagtaaagaaagacaaggctgac
gattatgaaagtggaaattcagatattgtttacggccaacatttagttgttcgagataca
aacctacatactagcacaagtactgcaccaaacagcaatgttccaaattttaaacgcttc
cgaaaggcagaaactcaatctggtaacagctttgacaatcttgttccatttgcaaaatat
ccatacaaggattctgactgtgggaatgatgagacggctgagttggtgaaggaggagaaa
aggcgaaagaaaatggaagctgtggcagatgaactatttaataatcataagacaaaaaag
cgaggcactgttggttctcttcgcggcattcttacttaa
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