Cajanus cajan (pigeon pea): 109796868
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Entry
109796868 CDS
T04868
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj00040
Pentose and glucuronate interconversions
ccaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109796868
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109796868
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109796868
NCBI-ProteinID:
XP_020212289
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All DBs
Position
3:19834006..19836881
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AA seq
465 aa
AA seq
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MLQTTCILLLSVLTSFSPLATAMLNLTLPGAHPDPEAVAHEVHRKVNASIARREMLAVSE
KDESSCLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYAKGGKGGEFYVVTDSSDDDPV
NPRPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITLQY
ISNVIIHNIHIHHCHPSGNTNVRSSPEHYGFRTESDGDGISIFGSKDIWIDHCTLSRCKD
GLIDAVMGSTGITISNNFLSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSGEPTINSQGNRYYAPQNPFAKEVTKRVDTQQSKWKGW
NWRSEGDILLNGAFFVASGEGLEVKYEKAYSVEPKSADRITFLTMSAGVLGNARDNNLGM
WSRGPGDDAPDSSFEYTDDMSFTATMLLPSFLLLFSCTILLTVIL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaacaacctgcattttgctgctctcagtcctcacctccttttcacctcttgca
actgcaatgctcaacctaactcttcccggagcacacccagacccagaagctgttgcccac
gaagttcataggaaggttaatgcttcgattgcaagaagggaaatgctggcagtgtcagag
aaagacgagtcatcgtgtttaacgggtaaccccatcgatgattgttggaaatgtgaccca
gattggcccaataaccggcagagattagcagactgcgccattgggtttggtcagtatgcc
aagggagggaaaggtggtgagttttatgttgtcactgactcctctgatgatgaccctgtt
aacccaagacctggcacgcttagatacgcagtcatacagaacgagccactgtggatcgtg
ttccctagtaacatgatgattaagctctctcaagagcttatttttaacagctataagacc
atcgatggacgcggcgctgatgtgcacattgtcggaggaggctgcattactttgcagtat
ataagcaatgttatcatacacaatattcatatccatcattgtcatccctcagggaacacc
aacgttcgatcaagtccagagcactacggttttcggacagaatcagacggtgacgggatt
tccatattcgggtcaaaggacatatggattgaccactgcacgctatcacggtgcaaggat
gggctcatagacgcggtgatgggttccaccggaataaccatctccaacaacttcctctcc
caccacaatgaggtcatgctccttggccacagcgacgactacctcccggactcaggaatg
caggtcaccatcgccttcaaccacttcggggagaagctcgtccagcgaatgccgcggtgc
cggaggggctacatccatgtggtcaacaacgacttcactcagtgggagatgtatgccatt
gggggcagtggtgagcccaccattaacagccagggcaaccgctactacgcaccacagaac
ccctttgccaaggaggttactaagagagttgacacacaacagtccaagtggaagggatgg
aactggaggtctgagggtgatattctgctcaatggagctttctttgttgcttctggggaa
ggacttgaggttaagtatgagaaggcatacagcgttgagcctaagtctgctgatcgcatt
acttttctcaccatgtccgcaggtgttcttggcaatgctagggataacaaccttggaatg
tggagcagaggacctggggatgatgctcccgattccagctttgaatacaccgatgacatg
tccttcactgcaacgatgcttctgccatcttttcttctcttgttctcttgcacaatactg
ttgacggttattctatga
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