Cajanus cajan (pigeon pea): 109796890
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Entry
109796890 CDS
T04868
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109796890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109796890
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
SR proteins
109796890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Transformer
RRM_occluded
RRM_7
RRM_3
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109796890
NCBI-ProteinID:
XP_020212323
LinkDB
All DBs
Position
3:complement(8086171..8091628)
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AA seq
260 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGGGGRFGISRHSEYR
VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTE
FRNPWARAYIRVRKYESSRSRSRSRSPSRSRSPKRVRSRSLDRSVSRSRSRSRSASPIKS
SRPRSRSRSGSPRQVLSGSG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttttctcgcacaatttatgtcggcaacctgccctctgatataagagag
tcagaaattgaagatctattctacaagtatggccgtataatggatattgaattgaagatt
cctccccgccctccatgttattgctttgttgagtttgataatgctcgagatgctgaagat
gcaattcgtggtcgagatggatacaattttgatggttgtcggttaagggtggagcttgct
catggtggtagagggccatcatcaagtgatcgacgtggatatggaggaggaggtggtggt
ggtggtggcggcggcggtggtggtggccgttttggcatctcacgccattcggagtatcga
gttattgttcgtggactcccttcttctgcatcctggcaagatttgaaggatcatatgcga
aaagctggtgatgtttgttttgctgaggtttcccgtgatagtgaagggacttttggcatt
gttgattacactaattatgacgacatgaagtatgctattcgaaaattggatgacactgag
tttagaaacccttgggcgagagcttatattcgggtgaggaaatatgagagtagtcgttct
aggagccgcagcagaagccccagcaggagcagaagtccaaaaagggttagaagtagatct
ttggatcgttctgtgtctaggtcacgatctagatcacgatcagcatcaccaatcaaatct
tccaggccaaggtcacgttcacgatctggttctcctcgccaggttctgtcaggtagtggt
tga
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