Cajanus cajan (pigeon pea): 109797055
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Entry
109797055 CDS
T04868
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109797055
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
General mRNP proteins
109797055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109797055
NCBI-ProteinID:
XP_020212542
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All DBs
Position
3:2855384..2862468
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AA seq
548 aa
AA seq
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MDFDEYDYLEKTVEEQEDRDSSRRKKESGEKSERSYRKREEIDDGADERRSKRSRGDDEN
GSRKERDREERDKERRRSSRDRDRDGERSSRDRDREKERDKERDRRDRDKEREKREKERE
KERERERERRDREREERERSRRSRSRSERERDRERDFDTRDGRRFRDKKEAAEPEADPER
DQRTVFAYQMPLKASERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA
IALSGQLLLGQPVMVKPSEAEKNLVQSNTTSGAAGVVGPYGAVDRKLYVGNLHFNMTEGQ
LREIFEPFGPVELVQLPLDLETGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSS
VTDHVGNQDTTAKSADFDDDEGGLALNAQSRALLMQKLDRSGIAASIGLPVVNGSAPAQQ
AIMPIGNPGIIPAPAVPTQIMPTPVIEPVGNPTECLLLKNMFDPNTETEPDFDLDIKEDV
EEECSKYGRVKHIYVDKRSAGFVYLQFETVEAASAAQRAMHTRWFAGRMISAIFMQPQIY
EAKFKGDA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgattatttggagaagacagtggaggagcaagaggacagagac
tcgagcaggaggaagaaagagagcggtgagaagagcgaaagaagctaccggaagcgcgag
gagatcgacgacggcgctgacgagaggaggagcaagaggtcaaggggcgacgacgagaat
ggctccaggaaggagagagatcgcgaagaacgcgacaaggagcgccgcaggagtagcaga
gacagagacagggatggagagagaagtagcagagacagggacagggaaaaggagagagac
aaagagagggatcggagggacagagataaagagagggagaagagggagaaggaaagggaa
aaggaaagagaaagagagagagaaagaagggatagagaaagggaggagagagagaggtct
cggaggagcagaagtcgttctgagcgagaaagagatagagaaagggatttcgacaccaga
gatggccggagatttagggacaagaaagaggcagcagagcctgaggcagatccagaacgg
gatcagagaactgtatttgcttatcagatgcccttaaaggcatcagagagggatgtttat
gaattcttctcaaaagcgggcaaggtgagggatgtccgtctgatcatggataggaactcc
agacgatctaaaggagttgggtatattgaattttatgatgcaatgtcagtgccaatggca
attgccctctctggccagcttcttctaggacaacctgtaatggtcaaaccttctgaggct
gaaaagaaccttgtccaatctaatactactagtggagctgctggggtagtaggaccatac
ggagctgtggacagaaaactgtatgtggggaaccttcacttcaacatgacagagggtcaa
ttgagagagatttttgagccatttggtccagtggagcttgtgcagctgcctcttgacttg
gagacgggacattgcaagggctttgggtttgttcaatttgcccatcttgagcatgccaag
gctgctcagagtttaaatggaaaattggagattgctggcaggactatcaaggtttcatct
gtaactgatcatgttggaaaccaagatacaactgcaaaatctgcagactttgatgatgat
gaaggtggtttggctttaaatgcccaatcaagagcattgcttatgcagaagctggaccgc
tctggcattgctgcaagcattggtctgcctgttgtcaatgggtcagctcctgctcaacag
gctattatgcctattggtaatccaggtataataccagctccagctgtcccaacacaaatt
atgcctaccccagtgattgaacctgttggaaaccccactgagtgtttactgttgaagaat
atgtttgatcccaacactgagacagaaccagattttgatctagacattaaagaggatgta
gaagaagaatgttccaaatatggacgggtgaagcatatctatgttgacaaaagaagtgca
ggatttgtgtatttgcagtttgaaacggtggaagcagcaagtgctgctcaacgtgcaatg
cacacgaggtggtttgcaggcagaatgatttctgctatcttcatgcaacctcagatatat
gaagccaagtttaaaggggacgcatga
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