Cajanus cajan (pigeon pea): 109797056
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Entry
109797056 CDS
T04868
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109797056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109797056
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109797056
Complex C
U4/U6.U5 tri-SnRNP related factors
109797056
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
C2H2-zf_KIN17
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
109797056
NCBI-ProteinID:
XP_020212543
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All DBs
Position
3:22316595..22320051
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AA seq
201 aa
AA seq
DB search
MANTSNNVVGVDNTFRRKFDREEYLERARERERQEEEGRAKPKAKGPPVQRKPLKHRDYE
VDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVE
RASLKQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEERKRLRREKKKEKKEKAVEE
PEIDPDVAAMMGFGGFRSTKK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaccagcaacaatgtcgttggagttgacaacacattcagaagaaaatttgat
cgggaggagtatctggaacgtgctcgggagcgcgagagacaggaggaggagggtcgagct
aaacctaaagctaaaggtcctcccgtgcagaggaagcccttgaaacatagagattatgaa
gtggaccttgaatcccgcttggggaagactcaggttgttacaccggttgcaccacttagt
cagcaggctggatactactgctcagtttgtgagtgtgtggtaaaggactctgcaaactac
ttggatcatattaatggaaagaaacatcaaagagctttgggcatgtctatgcgagtagaa
cgtgcttctctcaaacaggttcaggaacgatttgaagttctaaagaaacgaaaagatgtt
ggaagcttcacggagcaagatcttgatgagcggattttaaaacagcagcaagaagaggaa
gaaagaaagcgactgcgtcgggaaaagaaaaaggaaaagaaggagaaggcagtggaagaa
cctgaaattgatcctgatgttgcagccatgatggggtttgggggtttccggtcaaccaag
aaatga
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