Cajanus cajan (pigeon pea): 109797213
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Entry
109797213 CDS
T04868
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109797213
04121 Ubiquitin system [BR:
ccaj04121
]
109797213
Enzymes [BR:
ccaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109797213
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109797213
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109797213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-HC5HC2H_2
zf-RING-like
zf-HC5HC2H
DUF7573
Anti-TRAP
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109797213
NCBI-ProteinID:
XP_020212759
LinkDB
All DBs
Position
3:23437824..23443691
Genome browser
AA seq
374 aa
AA seq
DB search
MSSAGGDGDGDGGVTSGDPRQYFCHQCDRTVSVSPSPSTDLLCPDCNGGFLEELEIPNPN
PNPPNPFFSDFPLAGATSFPLVLPGTASPFDDLSALFGARSDAATGDAFEPLVFLQNYFQ
TLRAGGANLQLVIESGDPAGALRFPGNATHGDYFFGPGLEELIQHLAENDPNRYGTPPAS
KSAVEGLPDVTVTEELLASDSAQCAVCKDTFGLGETAKQMPCKHIYHADCILPWLELHNS
CPVCRYELPTDDPDYEQRARRGGGSSGGGVAGGPAPQVNWNLAGGSADLAGGSGGSGGGG
GDNLQRRRFRVSMPWPFRQLVSSAAETSNVGNANNDSNNNNSSNTNSGDNGRQLNSGNRG
NQNFESETRQEDLD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgccggcggcgacggtgacggcgacggcggcgttacctccggcgaccctcgc
caatacttctgccaccagtgcgaccgcaccgtctccgtttccccttccccctccaccgat
ctcctctgccccgattgcaacggcggcttcctcgaagagctcgaaatccctaaccctaac
cctaaccctcccaatccattcttctccgacttccccctcgccggcgccacctcctttccc
ctcgtcctccccggcaccgcctcgcccttcgacgatctctccgccctcttcggcgcccga
tccgacgctgccaccggcgacgccttcgaacccctcgtcttcctccagaactacttccaa
accctcagagccggcggcgccaacctccagctcgtcatcgagtccggcgaccccgccgga
gcgctccgattccccggcaacgccacccacggcgactacttcttcgggcctggcctcgag
gagctgatccagcacctcgccgagaacgatcccaaccgctacggcaccccgccggcctca
aagtccgccgtcgaggggctgccggacgtcaccgtcacggaggagctgctggcgtcggac
tcggcgcagtgcgctgtgtgcaaagacaccttcggactcggcgagaccgccaagcagatg
ccgtgtaagcatatatatcacgcggattgcattttgccatggttggaattgcataattct
tgtcccgtttgtcgctatgagttgcccacagatgatcctgattacgagcagagggctcgt
cgcggtggcggcagcagcggtggcggtgttgctggtgggccggctccccaggtgaattgg
aacttggctggtggttctgctgatttggctggtggcagtggcggtagcggtggcggcggt
ggtgataatttgcagcggaggaggtttagggtgtctatgccttggccgtttaggcaactt
gtttcttctgctgctgagacgagtaatgttgggaatgccaacaatgatagcaacaataac
aacagcagtaacaccaatagtggggacaatggtaggcaattgaattctggaaacaggggg
aatcagaattttgagtcggagaccagacaggaagatctcgactga
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integrated database retrieval system
