Cajanus cajan (pigeon pea): 109797331
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Entry
109797331 CDS
T04868
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109797331
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109797331
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_5
KH_KhpA-B
KH_Vigilin
MOEP19
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
109797331
NCBI-ProteinID:
XP_020212929
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Position
3:complement(10896125..10904319)
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AA seq
672 aa
AA seq
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MASSKRPNAESNGKGKRQKSSGGFSPLDVSPGSVVFRLLCPVSRIGGVIGKGGAIISQIR
QETGVKVKIEEAVSGCDERVITISGSDKEAEEDTAGKGREVNEDEAGNEGKDEEEKDGGN
GDGNEVKGSVPVEDSQSDKGNSEKGNSAIRKAISLVFERIVEGVEEATEGDEENNKSSCI
VLRLLVLTTQVGCLLGKGGSVIKRMAAESGAQIRILPKDKLPACATASDETVQITGGVEV
VRKALQSVSQQLLENPPRDHESMSANFTGPSTHSFGQFPSHNRSFPAGPHDISSFHSAPP
LITKFHEAAIHGRTRPVQEMLTFRLLCPADRVGNIIGKGGAIIRSVQQETASEIKVVEGP
PDSEDCVVVISGPAHPDDRVSPVQEAVFRVQTRIAKAIPDGKEHTILARFLVSSNQIGCL
LGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKH
HFFRDSYPSANYPLNSPFLDQLPPFPPYLGRRGLSPPGMYSDLGPPPPHMGFHLDDRPPF
LNNIHRPGLPPHISERKPWGPQGILEGGAPIGMPDFPGGPPRRISAFAGGSQPIITSTTV
EVVVPRALVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSL
IQAFVMSERESG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctaagaggccaaatgcggagtcgaatgggaaagggaaacgccaaaaatct
tcaggcggtttttcgccgttggatgtttctccggggagcgtggtgttccgtttgctctgt
cccgtttctagaataggtggtgttattggcaaaggtggtgctatcatatcgcaaattcgc
caagagaccggtgtgaaggtgaagattgaggaagctgtgtctgggtgcgatgaaagggtt
attactatatcaggttctgataaagaggctgaagaagatactgctgggaagggaagggag
gttaatgaggatgaggctgggaatgaggggaaggatgaggaggagaaggatggtggcaat
ggggatggtaatgaagttaaaggttctgttccagtggaagattcgcagagtgacaagggt
aattccgagaagggtaattcggctattcggaaggctatctcactggtttttgagaggata
gtcgagggagtagaggaggcaactgagggggatgaagaaaacaataaatcttcttgcatt
gttcttaggttacttgttcttactactcaagttggttgcctcctaggaaagggtggcagt
gtgataaagagaatggcagctgagagcggggcacagattcggatccttcctaaggacaaa
cttccggcgtgtgcaacggcttctgatgagacagtgcagatcacagggggtgtagaagtt
gtcaggaaagctcttcaatctgtttctcaacagctcttggaaaatccacctcgggatcac
gagtccatgtctgcaaattttacagggccatcaactcattcatttgggcaattcccatca
cacaaccgttcttttcctgctgggcctcatgatatttcttcttttcattctgccccccct
ttgattaccaaatttcatgaagctgccatccatggtcgcacaaggcctgtacaggaaatg
cttacttttcgtttattgtgtcctgcggatagggtaggaaatataattggtaaaggtggg
gcaatcataaggtcagttcagcaagagacagcaagtgaaatcaaggttgtagaaggccct
ccagattcagaagactgtgttgttgttatatctggtccagcgcacccagatgatagagta
tccccggtgcaagaggctgtatttcgtgtgcaaactagaatagccaaggctatacctgat
ggcaaagagcatactatattagcaaggtttctggtttcttccaatcaaataggttgtctc
cttggcaagggtggttccatcataactgaaatgaggaagaaatcaggggcccatattcgt
atattaggaaaggataaggttcctaagtgtgcttctgaagatgaagaagtaattcaggta
aatggagaaattgaggcagtgcatgatgctcttttgcaaataaccactagattaaaacat
catttcttccgcgattcatatccatctgctaattatcctttgaattctccatttctggat
caactccctccgtttccaccatatctaggaaggcgtggactttcacctcctggaatgtat
tctgacctagggcctccaccaccacatatgggttttcatcttgatgaccgccctcctttt
ttgaataatatacatagacccggccttcctcctcacatatctgaaaggaagccttggggt
cctcaggggatacttgaaggtggtgcacccattggcatgccagactttccaggaggtcct
cccaggagaatttcagcatttgcaggagggagccaaccaattatcacaagtacgactgtt
gaagttgttgttcctcgagcactggtgcctgtaatatatggggaagatggtgaatgtctg
aaacaaatacttcagatctctgatgcaaatattactatcactgatccaaagcctggagct
gtggaaacaaaaattataatatctggaaccccagagcaaactcatgctgcccaaagtctt
attcaggcatttgtgatgagtgagagggagtctggttga
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