Cajanus cajan (pigeon pea): 109797363
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Entry
109797363 CDS
T04868
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109797363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109797363
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
SR proteins
109797363
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
109797363
NCBI-ProteinID:
XP_020212975
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All DBs
Position
1:15333164..15336730
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AA seq
251 aa
AA seq
DB search
MRPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEF
GRKGRRIRVEWTKQERDSRRSGDAKKSSSNSRPSKTLFVINFDPVHTRTRDLERHFDVYG
KILNIRIRRNFAFIQYETQEDATKALESTNLSKFMDRVITVEYAIRDDDDRDRRNGYSPD
RRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKYERAESPINGRYDS
RSPPPRDRSRS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgttttctgcggaaacctggattttgacgcgcgtcaatctgacgtcgagagg
ctcttcagaagatacggcaaggttgatagagttgacatgaaatccgggtttgcttttgtc
tacatggaagatgaacgtgatgctgagtatgccataagaaggctagatagaacggaattt
ggtagaaagggacgtcggattcgtgttgagtggactaagcaagaacgtgacagtagaagg
tcaggtgatgccaaaaaatcttcatctaattcaagaccatccaagactttgtttgttata
aattttgatcctgttcacaccaggacaagggatctcgagagacattttgatgtctacggg
aaaattttaaatataaggatcagaaggaattttgcttttattcagtatgaaacccaggag
gatgctacaaaagctttggaatcgaccaacctgagcaagtttatggaccgtgttataaca
gtggagtatgccataagagatgatgatgacagagacagaaggaatggatacagtcctgat
agaagaggtcatgactctcctgatgggagatacggtcgtggtagatcccctagtccatat
cgtagaggtaggggtagcccagattatggtcatggatcaaatccatcttccagaccagaa
ccaagaggaagcccgaagtatgaacgagctgaaagcccaataaatgggagatatgatagc
cggtctcccccacctcgagataggtcgcgatcctga
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