Cajanus cajan (pigeon pea): 109797521 Help Entry 109797521         CDS       T04868                                  Name (RefSeq) endoribonuclease Dicer homolog 1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism ccaj  Cajanus cajan (pigeon pea) Brite KEGG Orthology (KO) [BR:ccaj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ccaj03036]     109797521 Chromosome and associated proteins [BR:ccaj03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     109797521    microRNA pathway     RISC loading complex      109797521 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ DND1_DSRM Helicase_C dsrm DEAD ResIII Dicer_dsRBD Dicer_PBD SNF2-rel_dom Cas3-like_C_2 SWI2_SNF2 Motif Other DBs NCBI-GeneID:  109797521 NCBI-ProteinID:  XP_020213167 LinkDB All DBs Position 3:complement(29072489..29085573) Genome browser AA seq 1947 aa AA seqDB search MEDGGRVPAGDDPSYWLDACEDISCDFIDFDVSSIVSDQPDNASNQDFFGGIDKILDSIK NGSGLPLHAESNSNSAGGQVSLPNDASNATLEGGENHAPAPAPAPAPDASVAAQSNGSCK MTNGNEGGALVNHSRERGTLTLNGGHDVDGEERCGKRARLGGYKNERPYYGRGNNYQGKE RERCFNNRKRPRDRDEIDRRDKDGVRKREHYGNCGKRDVRDRDWRDRETRGYWERDKSGS NDMIFRLGAWEPDRIREDKMVSEAKQENNGKVDKKSEEAKERVPEEKARQYQLDVLDQAK KKNTIAFLETGAGKTLIAVLLIRSIQESLQKLNKKMLAVFLVPKVPLVYQQAEVIRERTG YQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECH HAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSI VCTIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMEVEVEEAAKSSSRRSKWQFM GARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKVAQSFLAALQ NDERANYQLDVKFQESYLSKVVSLLKCQLSEGAVSDKNAGTDDSENGAAQSVSEHEEMEE GELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVSA LVLPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGL DIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLRNARNSEETLR KEAIERTDLSHLKDSSRLISVDTRPGTVYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYS ILRPEFIMEKHEKSGGPTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHE MGAFTDMLLPDKGSGGEREKDEQIDEGDPLPGTARHREFYPEGVADILKGEWILSGKDAC NNSKLLHLYMYAVKCENIGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTVTTK ASLVLRGPINITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVSDKSVD PMNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQK SHPTYGIRGAVAQFDVVKASGLVPHRDAEQTQKHINMTTNGKLMMADTCTNAEDLVGKIV TAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYKQQPLIR GRGVSYCKNLLSPRFEHSEAHEGESEETHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPS IMRRIESMLLAVQLKNMINFPVQSLKILEALTAASCQETFCYERAELLGDAYLKWVVSRF LFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDE DTKDGDSSLFDQERSISKTEKMDCHTDGYEDEMEDGELESDSSSYRVLSSKTLADVVEAL IGVYYVEGGRNAANHLMKWIGIQIEFDPDEMECSRKPFNVPDSILRSVDFDALEGALNIK FKDRGLLVESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRA AAVNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQDELSKPGFNSFGLGDCKAPK VLGDIVESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGL EYKASRIGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVGKTQEKNDEN GKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECI GEPMPSVKKAKDSAAVLLLELLNKLYS NT seq 5844 nt NT seq  +upstreamnt  +downstreamnt atggaggatggaggtagggttccggcgggggatgacccctcttactggctcgatgcttgt gaggacatatcgtgtgatttcattgattttgatgtctcatccatcgtgtccgaccagcct gacaacgcttccaatcaggactttttcggtggcattgataaaattttggacagcatcaag aacggttctggtcttcctcttcatgctgaatccaattccaactctgctggaggacaagtg tcgttgcctaatgatgcctccaatgccactttggagggtggggagaatcatgctcctgct cctgctcctgctcctgctcctgatgcttctgttgctgctcagagtaacggctcttgcaag atgaccaatgggaatgaagggggtgctttggttaatcattctcgggaaagagggactctc actctcaatggaggccatgatgttgatggtgaagagaggtgtggcaaaagggctcggctt ggtggctacaagaatgagagaccttactatggtagagggaataattatcaagggaaggag agggagaggtgttttaacaacaggaagaggcctagggatagggatgagattgataggagg gataaggatggtgttaggaaaagagaacattatggtaattgtggcaagagggatgttaga gatagggattggagggatagagaaactaggggttattgggagagggataagtcaggttcc aatgatatgatctttcgcctgggcgcctgggaacctgatcgtattcgagaagacaaaatg gtgagtgaggcaaaacaggaaaacaatggaaaggttgataagaaatctgaggaggctaag gagagggttcctgaggaaaaagctagacagtatcagttggatgttcttgatcaggcaaag aagaaaaatactatagcttttcttgaaactggagcagggaaaaccttaattgctgttctt ctcattagaagcatacaggagagtttgcagaagctaaataagaaaatgcttgcagttttt ttagttccaaaagttccacttgtttaccagcaagctgaagtaattcgtgagcggactggt tatcaagtgggccactattgcggagaaatggggcaggatttttgggatgctcgaaggtgg cagcgtgaatttgacaccaaacatgttttagtcatgaccgctcaaattcttttgaacatt ttgaggcatagcataataaaaatggaagcaatcaatctattgattctggatgagtgccac catgctgtgaagaaacacccatattcattggtgatgtctgagttctaccatacaacaccc aaagagaagaggccatctgtatttggaatgactgcttctcctgttaacttgaagggtgtc tccagccaagtagactgtgcaataaaaattcgtaatcttgaaagtaaactagattctata gtttgcacaattaaagatcgtaaggagctggagaaacatgtgccaatgccctctgaagtt gtggtggagtatgataaagctgccagtttatgttatttgcatgagcagataaagcagatg gaggtagaggttgaagaagctgcaaaatctagttcaagaagaagcaaatggcagtttatg ggagctagagatgctggagctaaggaagagctgcgccaagtatatggcgtttctgaaaga acagaaagcgatggagctgcaaacctaattcagaagttgagagctgttaattatgcactt ggtgaactgggacaatggtgtgcatataaggttgcacaatcctttttagcagctttgcaa aatgacgaaagggcaaactaccaacttgatgtcaagtttcaggaatcttatctaagtaaa gttgtctctcttctgaaatgccaactgtcagagggtgcagtttctgacaaaaatgctggc acggatgactcagagaatggtgcagctcaaagtgtgtctgaacatgaagagatggaagaa ggagagcttccagacagtcacgttgtctctggcggagagcatgtggatgtcattatagga gcagctgtggctgatggcaaggtgaccccgaaggtgcaggcactaatcaaaatacttctc aagtatcagcatacagaagatttccgtgcaatcatctttgttgagcgtgttgtgtctgca ttagttctgcccaaggtctttgcagagcttccatctcttagttttgtgaagtgtgcaagc ttgattggtcacaataacagtcaggaaatgcggacctaccaaatgcaggatacaattgcc aagtttcgtgatgggcgggtcacattgttagttgccactagtgttgctgaagaaggactt gatatccggcaatgcaatgttgttattcgctttgaccttgcaaagactgttctggcatac attcaatctaggggccgtgctagaaagccgggatctgattacatcttgatggttgagagg gggaatttgtctcatgaagcattcctaaggaatgccaggaacagtgaggagactttgcgc aaagaagcaatagagagaacagaccttagtcatctgaaggacagttctagattgatttct gttgacacccggcctggaacagtgtaccaggtgaagtcaactggtgcagttgtgagctta aattctgctgtaggtcttatccacttctactgctctcagctaccaagtgacagatattca attcttcgaccagagtttattatggagaagcatgaaaaatcaggaggtcctacagagtat tcttgcaagcttcagctgccgtgtaatgcaccatttgaaaatcttgagggtcctatatgc agttctatgcgtttggcacaacaggctgtttgtctggctgcttgcaagaaactgcatgag atgggagcattcactgacatgctattgcctgataaaggaagtgggggagaaagagaaaag gatgaacaaattgatgaaggagatccacttccagggactgccagacatagggagttctat cctgaaggtgtggctgacatactgaagggagaatggatcctctctggaaaagatgcttgc aacaactccaaattgcttcatctttacatgtatgctgtgaagtgcgaaaatataggccat tcaaaggatccgttcttgactcaagtttcaaattttgcagtactttttggcaatgagctg gatgcagaggtgttatcgatgtcaatggatctatttatcgctcgaaccgtgactacaaag gcatctcttgtcttaagagggccaataaatatcactgagagtcagctggcatccctgaaa agctttcatgtaagattaatgagcattgtcttggatgtggatgttgaaccatctaccact ccttgggatcctgcaaaagcatatttgtttgtcccaatggttagcgataagtctgtagat cctatgaaccaaattgactggcatctggttgagacaataattggagctgatgcatggaag aatcccctccagaaagctcgaccagatgtttaccttggtactaatgagagaacattaggt ggagacagaagggaatatggatttgggaaattgcgtcatggcatggcttttggacaaaaa tcgcatcctacctatggaatcagaggagctgtggcccagtttgatgtggtgaaagcttca ggattggttccgcacagagatgccgagcaaacacaaaagcacatcaatatgactaccaat ggaaaattgatgatggcagatacctgtactaatgcagaggatctggtagggaaaattgta actgctgctcattcagggaagaggttttatgttgattcaatacgctatgacatgtcagca gaaaactctttccctaggaaagaaggttatcttggtcctctggagtacagttcatatgct gattactacaagcaaaagtatggggttgatttgatttacaagcagcaacctctcataaga ggccgtggtgtatcatactgcaagaatcttctgtcccctcgatttgagcacagtgaagca catgaaggtgaatctgaagagacacatgacaaaacttattatgttttccttcctcctgag ctatgcctagtacacccactgcctggatcacttgtccgtggtgcccagaggttaccttca ataatgaggaggattgaaagtatgctacttgcagttcagcttaagaatatgataaatttt cctgtccagtctttaaagatattggaagccttgactgccgcctcttgccaggagacattc tgttatgaaagggcagagcttcttggagatgcttacctgaaatgggttgttagtcgattt cttttcctaaaatacccacagaaacatgaaggtcaacttactaggatgagacaacaaatg gtcagtaacatggtattatatcagtatgcattaagtaaagggcttcaatcatatattcaa gcagatcgctttgccccatccagatgggcagctcctggggttctgcctgtctttgatgag gataccaaggatggggactcatctttgtttgaccaagagcgatccatttctaagactgaa aagatggattgtcacacggatggatatgaggatgagatggaagatggtgagcttgagagt gattcaagttcttacagagttctgtccagtaagacacttgcagatgttgtggaagcgctg attggggtatattatgtagaaggcggtaggaatgctgctaaccaccttatgaaatggatt ggcattcaaatagagtttgatcccgatgagatggagtgttcaagaaagccctttaatgtt ccagacagcatacttaggagtgttgattttgatgctttagaaggtgctttgaatattaag tttaaagacagggggctgctggtagaatccataactcatgcctccagaccatcttcagga gtatcctgttatcagcgattagagtttgttggtgatgccgtcttggatcatcttattacc aggcatttgtttttcacttacacaaatctgccacctggacgtctgactgaccttcgggct gctgctgtaaacaatgaaaattttgcgcgtgttgcagttaaacacaaccttcatgtgcat ctccggcatgggtccagtgccctagaaaaacagattaaagaatttgtgaaggaagttcaa gatgaattgtcaaagccaggttttaactcctttggtctgggagactgcaaagctcctaag gtccttggtgacattgttgaatctattgccggtgccattttccttgacagtgggagggat actactgttgtttggaaggtttttcagcctcttttgcatcctatggttaccccagagact ctgccaatgcatcctgtgcgtgagctgcaagagcgatgtcagcagcaagctgaaggatta gagtataaagcaagtcgtataggcaatttggccactgttgaagtattcattgatggggtg caagtaggggctgctcaaaatccacagaaaaaaatggcacagaaattagctgcaagaaat gctcttgctgcattgaaagagaaggaggttggaaaaactcaggagaagaatgatgaaaac gggaaaaagaatggaaaccagacgtttactagacaaacattaaatgatatctgtttacga agaaattggccaatgccattctacaggtgtgtgaatgagggtggtccagcacatgcaaag aggtttacatttgctgtgcgtgtcaataccactgatagaggatggacggatgaatgtatt ggggagccaatgccaagcgtcaagaaggccaaagactcagctgctgttcttctcttagaa ctactaaacaaattatactcgtga

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