Cajanus cajan (pigeon pea): 109797653
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Entry
109797653 CDS
T04868
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109797653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109797653
Enzymes [BR:
ccaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109797653
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
109797653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
REV3_N
POL3_N
DNA_pol_B_exo1
Zn_ribbon_RanBP
zf-C4pol
Zn_ribbon_TEX13
Motif
Other DBs
NCBI-GeneID:
109797653
NCBI-ProteinID:
XP_029126892
LinkDB
All DBs
Position
3:complement(21687135..21721776)
Genome browser
AA seq
2817 aa
AA seq
DB search
MSDSQSNSEVFSVRIVSIDHYMAPPIPDADICYSSFHGGKVNEVPVIRVYGSTPAGQKTC
LHIHRALPYLYVPCSDIPLQLDQGDAYTYKVAASLERVLKLKGSAGSTRQHVHGCSFVRA
RKFYGYHSFEELFVKIYLVSLDWCLRYYPQDVSRAATLLLAGAVLDKSLQPYESHIPFIL
QFLVDYNLYGMGHLHLSKMKFRHPIPDTCEKFNIESQQQHRKADTDGHACSESRLWMSSM
VPSEWMWSLPNKFSALSNDEAHCPKRQSTCELEGDTSVDEILNQQFKMYSSLSQTCSDVN
MVQSLVPIWEEQQKRTGIQETTMPSDPCKPLPQDVMKLFSVGLDFEKKIIELCCEAETSL
FCTPSGKELRETDIIGSASPPASLCKNALNCCRETDIIGSLSPPASLCKNAKLHEEGNDT
SLEMLTMDEIRSSEMIGTLDIKAADKEAQNLLKWLATSQAAEDINSDDELVYETILTPLL
PAATIDKVLEEANMAYENESQKECQDILDSIDDMHVLELPVEKRSHSFDHNGSIGASSNS
MLPQVDGSNDDEFSSPRGGFSGTSSLVEINSEYKRASEYHVQHNTDTSTVSKDKRNKQWG
SLPFSMMDKVNDVGEHATLLETHPFESETGDSAHSGYLNTNEVRNSACIIRNNGKDTSDS
NYSLRELMRRKRSYRVEQAEFESGTTKKLLLDKHREPNTCLWQNQLDLKTVQTDEEEKEH
QKSCGRKVSNHVNLVHGKLPLPAVNDSFLQATMPKGVCFSPHEMEGVEASKVLRNCSKGG
SSLMHGGPENFHFIDSIDQSVACMGENHKVGTAFTKPMASDACTQNHLLDTRLRTSAVHT
VRAPERSLQTNSSASSSVQSSFIDKNSGKYNCMGQSSDGNISFVQHDQMMFYENSVDRSA
ANDMQVLLSEKVDNQKMDENLLHDTIGSEPTDLKGSHMKLAEGKNPLDDKNLESTLSLPT
TSNTNLHLDEDSCDEMPGNALDVFPPISARDSLKEMETCNKYGPIKTLTSNGMKGVITHY
QNDGSHLYLLTPNILPPPADTVHRWLCCDEREIDAEDKGVPKCATETAPLLMTKLYQDAD
TEKKPPCTGKGQTERVKTCLDDSQDISQISGPDGKSSFTPLSQIGFRDPASVGCGQQLTL
LSIEILAESRGDLLPDPQFDGINIVALGFQNDGDSIVEVLVLLHNKSGPCQRSFDGLSGC
KILVFTDEKLLLKEFIKIVSSSDPDILMGWDIQGSSLGYLAERASHLGLGLLNNLSRTPS
ESLIASEDTKSSEKDILELDIHDTPNLDCCVPENSIIEDEWGRTHASGVHVGGRIVLNVW
RLIRGEVKLNLYSVEAVAEAVLRQKIPSFHQKVLTKWFSSGPGRARYRCIKYVTERVKLN
LEILNQLDMVNRTSELARVFGIEFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGKQQVA
SQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVAQKANTLGV
SSFSPEQHVLQDLKDQILLTPNGVMFVPSKVRRGVLPRLLEEILTTRIMVKQAIKKLAPS
EQVLQRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNL
HEKWNAKVIYGDTDSMFVLLRGRTIKESFQIGNEIASAITAMNPSPVTLKLEKVYHPCFL
LTKKRYVGYSYESPGQIEPVFDAKGIETVRRDTCGAVAKIMEQSLRLFFEHHNLLEVKVY
LQRQWKRILSGRFCLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDPRSEPRYAER
IPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNH
WFSEMPRPIREASVKHTLTSNFHRTRIDYYYLSKHCVLCDRLVQASARLCNQCSENEVAA
ATALISKTSKLEQEMQHLVAICHHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAAT
HVAADKELYPRCTVEXXSLTLLGMAYGYRYRPFSLLLTRTLHLSSSINPKPSFSFSLSHL
LPKPLSTTPDSNPKPSSLSARLSFVFDQIDAIEKERSQKHETLQRIRAWRQSKDTPSPPP
QNEAQPESPLSAVDSPPEPPPKKELEFVHPWPEWIQLMETLVHQNYFDHRRRDEDKMVHD
LGFDPPEVAEGFDFTNDFKSVQMACLNFGRDRFDILRSLSRKDIQLLVGYGCPTVDKRVV
FSAKLLRKYAHLDEGDVCSSCSLRNNCERAYLLTNKEDEARTLDVMRLLLTFGFDPVDGS
VINKSLLRQKSVKTVVRKLLHEVVKLGSVPIDPNLPPPVFKKPPPKVKQPPPPPKRRVGR
DDVEMKKGDWLCPKCEFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNVVCF
HCECKRPPDELLENKMQDRTHSSRPMLDKMPSRQEVSNAWNFDFDDNESDGADVAAFEYA
DTRAINENFSSDNNDRHGNHRGWEDNFEKNRIEGSPEGEYRPRMGFDDFEDEDDIDSYEL
ETTQNSSRRTETSINNFSEAENFSESEDIEGSDDEMHARHKTASERSVQSRSIRKNTSFS
RFKDDEHDFVTDEQLSVLSNFKSGHVSAADQKRKGRGSAKKLSFGSESEEDISAGLYSDE
DEAYSFRKNKGNKFDPSRQNKGNRHDSGRSSFAKNRKSGSIGGRQANMFSYDFDGSSQQS
YRNGRGSKRNDRGSKGNDRWKSFDDFDRGSKGNDRWKSFDDFDGPSRRSYGDGRGSRGNN
RNGSSRQSYGNGRGSRGNDRHRHKFEDREHGTGQFNKYSVDEKGFEEFRNSRRVIER
NT seq
8454 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcacagtcgaattcagaggttttcagcgttcgaattgtctccatcgaccat
tacatggcaccgccaatcccagacgccgatatctgttatagtagcttccatggtggaaag
gtgaatgaggtgcctgtaataagagtgtatggttctactcccgctggccagaagacttgc
ttgcacattcatcgagctttaccctatttatatgtgccgtgttcagatataccactccaa
ctagaccaaggtgatgcatacacctataaggtggctgcttctctcgagagagtcttaaag
cttaaaggcagtgctggttcaacaagacaacatgtacatggatgcagctttgtacgagca
aggaaattttatggctatcattcatttgaggagttatttgtaaagatatacctagtaagc
cttgactggtgcttaagatattatccgcaagatgtctcccgtgcagctactcttctcttg
gctggagctgttcttgataaaagtttacagccttatgaatcacatattccctttattctt
cagtttctggttgattataacttgtatggcatgggtcatttgcacctatcaaagatgaag
ttccgccaccctatacctgacacttgtgagaaatttaatatcgaaagccagcagcagcat
agaaaggcagatacagatggtcatgcatgttcagagtcaagattgtggatgtcttccatg
gtcccatctgagtggatgtggtctctcccaaacaaattcagtgccttgtcaaatgatgag
gctcactgtcctaaacgccaaagcacctgtgagcttgaaggagatacttctgtagatgag
attcttaatcagcagtttaaaatgtattcatctctttcacaaacatgctcagatgtcaac
atggttcagtcacttgtaccaatatgggaggaacagcagaaacggactggaattcaggag
actaccatgccttctgatccttgcaaaccacttccacaagatgttatgaaacttttctct
gttggtcttgacttcgagaaaaaaattattgaattgtgctgtgaagctgaaacctcttta
ttttgtactccttctgggaaggaattgagagaaacagacataataggatcggcatctcca
ccagcttcattatgcaaaaatgccttgaattgttgcagagaaacagacataattggctca
ttatcaccaccagcttcattatgcaaaaatgccaaattgcatgaggaagggaatgacaca
agtcttgaaatgttgaccatggatgaaatccgatcatctgaaatgattggaacgttggac
ataaaggctgctgataaggaagcacaaaatcttctaaagtggcttgcaacttctcaagct
gcagaggatataaactctgatgatgaacttgtttatgaaacaatcttgactcccttgtta
cctgctgcaacaattgataaggtgctggaagaagctaatatggcttatgagaatgagtcc
caaaaggagtgtcaggatattcttgattcaattgatgatatgcatgtgttggagttacca
gtggaaaagcgttctcattcctttgatcacaatggttctattggagcttcatcaaacagt
atgctaccccaagttgatggttctaatgatgatgagttctcaagtccacgcggtggtttc
tctggaacctcttctctagttgagataaatagtgaatacaaaagggcttctgagtaccac
gtacagcacaatactgacacaagtacagttagtaaagataaaaggaataaacaatggggg
tctttgcctttttccatgatggataaggttaatgatgttggagagcatgctactttactt
gagactcatccatttgaaagtgagaccggagattctgctcactcaggttacttaaacact
aatgaggttagaaatagtgcttgtattataaggaacaacggcaaagatacttcagattca
aactactctttgcgggaattgatgaggcgaaagcgatcctatcgtgttgaacaagctgaa
tttgagtctggaactactaaaaagcttcttttggacaagcatagggagccaaatacatgc
ctttggcaaaaccaactggatttaaaaacagtgcaaactgatgaagaagaaaaggaacac
cagaagagttgtggccgcaaagttagcaatcatgttaatttagtgcatgggaaactgcct
cttccagctgtcaatgatagttttttacaagctacgatgccaaaaggcgtatgttttagt
ccgcatgaaatggaaggtgtagaagcaagtaaagtgttgaggaactgttcaaagggaggg
tcttctttaatgcatggtggacctgaaaattttcattttattgattccatagaccaatct
gtggcttgcatgggtgaaaaccataaagttggcacagcttttacaaaacctatggcttct
gatgcctgtacccaaaatcatttgttagacactcggttaagaacatctgctgttcataca
gtcagagctcctgagagaagtttacaaaccaattcttctgcttcaagtagtgtgcagagc
tcattcattgataaaaattctggcaaatataattgcatgggtcaaagttctgatggaaac
atatcttttgtgcaacatgatcagatgatgttttatgagaattccgtggacagaagtgct
gcaaatgatatgcaagtattgttaagtgaaaaagtggataatcaaaagatggatgaaaat
ttgttgcatgacactattggttctgaacccaccgacctaaagggtagtcacatgaaatta
gctgaaggcaagaaccccctggatgataagaatcttgagagtactttgtccttgccaacc
acctctaataccaatttacatttggatgaggacagctgtgatgaaatgccagggaatgct
ctggatgtctttcctcccatttctgcgagggattctctgaaagagatggaaacttgcaac
aagtatggtccaattaaaacacttacatctaatgggatgaagggtgtcatcactcactat
caaaatgatggctctcacctctacctattaacacctaatattttgcctcctcctgcagat
actgtgcatagatggctatgttgtgatgaaagagaaatagatgcagaggacaagggtgta
cctaaatgtgctactgagactgcacctcttcttatgactaagctgtatcaagatgctgat
acagaaaagaagcctccatgcactggaaaaggacaaacagaaagagtgaaaacatgccta
gatgactcgcaagatatttctcagatatcaggtcccgatggaaaatcaagttttacccct
ctgagtcaaattggatttcgagaccctgcaagtgttggctgtggacagcaacttacatta
cttagtatagagattcttgcagaatctagaggagaccttttacctgatcctcaatttgat
ggcatcaacattgtagctcttggttttcagaatgacggtgattctattgttgaagttctt
gttcttttacataataaatctggtccttgtcagagaagtttcgatggtctatctggctgt
aaaatattggtctttactgatgagaagctcttgttaaaagaatttataaagattgtgtct
tcatctgacccagatattttgatgggttgggatattcaagggagttctcttggctatcta
gcagaaagggcgtcacatcttggtttgggattacttaataatctgtctcgcactccatct
gagtctttgattgcttctgaagataccaaatcttcagaaaaagatatcttggaactggac
atccatgatacccctaatcttgattgttgtgtgccagaaaattcaataattgaggatgaa
tgggggcggacacatgctagtggagttcatgtaggtggcagaattgtcctcaacgtatgg
cgattgatacgtggagaagttaagttgaatttatattcagttgaagctgttgctgaagct
gtattgaggcagaaaattccttcttttcaccagaaggtgctgacaaaatggttttcaagt
ggtcctggacgtgcaagatatcgatgtatcaaatatgttacagagagagtaaagctgaac
cttgagatattaaaccaacttgatatggtgaatcggacatcggaacttgctcgtgtcttt
ggcatagagtttttttctgttctctctagaggatcacaataccgtgttgaatccatgttt
ctgaggttggcccatacacaaaactatcttgccatctcacctggaaagcaacaggttgct
tctcaacctgcaatggagtgcctacccctagtaatggaaccggaatctggattttattca
gatcctgttgttgtgcttgacttccagtctttatatccatccatgataattgcatacaat
ctttgcttttgcacttgtcttggtaaagttgtggcacaaaaggccaacacactaggggtt
agttcattctcaccagagcagcatgttctgcaggatttaaaggatcaaatcttgctcact
ccgaatggtgttatgtttgtaccttccaaggttcgaagaggtgtacttccgcgcttattg
gaagaaatcttaacaactagaataatggtaaaacaagcaataaaaaagttggcaccttca
gagcaagttcttcagcggatatttaatgcaagacagcttgctttgaagctcatagcgaac
gtaacatatggttacactgctgctggatttagtggtcgcatgccctgtgcagaacttgct
gacagtattgttcagtgtggccgtagtacactggaaaaagctatatcatttgtaaatcta
cacgaaaagtggaatgctaaagttatttatggagatactgatagtatgtttgtcctcctt
agagggcgcactataaaagagtctttccaaattggaaatgagattgcttctgctatcact
gctatgaatcctagccctgtcaccctgaagttggaaaaagtttatcatccgtgtttcctc
cttactaagaaacgatatgttggctacagttatgaaagccctggccaaattgaacctgtt
tttgatgctaaaggtattgagacagtacgcagggatacgtgtggtgcagttgcaaagata
atggagcagtctttgagactcttttttgagcatcataatttattggaggtgaaggtttat
ttgcaacgtcagtggaagaggattctttctggcagattctgccttaaagattttatcttt
gcaaaggaggttcgcttgggtacctacagtgcaagaatctcatcacttcctcctgctgca
attgtggccactaaggcaatgagggttgaccctaggtcagaaccacgttatgcagagaga
ataccctatgttgtaatccatggagagcctggagcccgcctggttgatatggttgtggat
ccattggaagttttggcaattgattctccatttagaataaatgatttatattacattaat
aaacaaataataccagctttacagagggtatttgggcttgttggtgctgacttgaaccat
tggttttcggagatgcctcgccccataagggaagcttctgtaaagcatacattaacttca
aatttccatcgaaccagaattgattattactatctttcaaaacattgtgtgttatgtgat
aggttggtccaggcatcagcccgtttatgcaatcaatgttctgaaaatgaagtagctgct
gcgacagcactgattagtaagacatcgaagttagagcaagagatgcaacatcttgttgct
atatgtcaccattgtggaggaggggataggcttctcgaaagtggtgtgaagtgcacgtcc
atttcatgcttggtgttctatgagaggcggaaggttcagaaagaactgctagctgccacc
catgttgccgcagacaaagaattgtatccgagatgcacagtggaatgataatccctcact
ctgttaggaatggcttatggatatcgttatcgtcctttctctcttctactaaccagaacc
ctccatctctcttcttccataaaccctaaaccctctttctctttctcactctcccacctt
ctccccaaacctctctccaccaccccagactccaaccccaaaccctcttccctctccgcc
cgtctcagcttcgtcttcgaccaaatcgacgccatcgaaaaagagcgctcacaaaagcac
gaaacgcttcagcgcattcgagcctggcgccaatccaaggacactccctctccgccccct
caaaatgaagcccagccggagtcgccactctccgccgtcgacagcccgccggagccgcct
cccaagaaggagctggagttcgtgcacccgtggccggagtggatccagttgatggagacg
ctcgtgcaccagaattacttcgaccacagaaggagggatgaggataaaatggtccacgat
ttggggtttgatccccccgaggttgctgaaggattcgatttcactaacgatttcaagagc
gttcagatggcgtgtctcaatttcgggagggaccggtttgatattttgaggtccttgtcg
aggaaggatattcaacttttggttggttatggatgccctactgtggacaaaagggtggtt
ttctctgctaaacttttaaggaagtatgctcatcttgacgaaggagatgtctgtagttcc
tgcagcttgagaaacaattgtgaaagggcgtatctgctaacaaacaaagaggatgaggca
cgaactcttgatgtcatgcggctcctgctgacttttggttttgatcctgttgatggatca
gtcatcaataagtcacttctaaggcagaagtctgtgaagacagtggttcgtaaattgctt
catgaggttgtcaagctgggttcagttcccattgatccaaatctccctcctccagtgttt
aaaaaaccaccaccaaaagtgaaacaacctcctcctcctccaaagaggcgtgttggacgg
gatgatgttgagatgaaaaaaggggactggctatgtcctaagtgtgaattcatgaatttt
gcaaagaatacggtttgcttacagtgtgatgccaagcgtcctaagagacagttgctgcca
ggagaatgggagtgccccgaatgcaacttcttgaattacaggaggaatgtggtatgcttt
cattgtgagtgtaaacgcccacctgatgaacttctggagaataaaatgcaagatagaaca
cacagttccagacctatgttagataagatgcccagccgacaagaggtttccaatgcatgg
aattttgactttgatgacaatgaatcagatggtgcagatgtagctgcttttgagtatgca
gatactcgtgctataaatgaaaatttctcttcagataataatgatcgacatgggaatcat
agggggtgggaagataattttgagaaaaacagaattgaagggtcccctgaaggagaatat
agacctagaatggggtttgatgattttgaagatgaggatgatatagatagttatgaacta
gaaactactcaaaatagtagtagaagaactgaaacatctataaataatttctctgaagct
gaaaacttttcagaatcagaagatattgaaggcagtgatgatgaaatgcatgcacgccat
aaaacagcttctgaaagaagtgtacagtcccggtcaattcgcaaaaatacatctttttca
agattcaaggatgatgaacatgattttgttacagatgaacaactgtccgtcctttccaac
ttcaaatctgggcacgtttctgctgctgaccaaaaaagaaaaggcagaggatcagccaag
aaattaagctttggttctgaatctgaggaagacattagtgctggcttatactctgatgag
gatgaggcatattcattcagaaaaaataaagggaacaaatttgatccatccagacaaaat
aaggggaatagacatgattctgggagaagcagctttgccaaaaaccggaaatctggatct
attggtggtcgccaagcaaatatgttcagttatgattttgatggatcatcccaacagtct
tacaggaatggtaggggttctaagcgaaatgaccgaggttctaagggaaatgatcgttgg
aagagttttgatgattttgaccggggttctaaaggaaatgaccgttggaagagttttgat
gattttgatggtccgtctcgacgatcatatggtgatggcagagggtcccgaggaaacaac
cgtaatggatcatcccggcagtcatatgggaatggcagagggtccagaggaaatgaccgt
catcggcataaatttgaagacagggagcatggcacaggacaatttaataaatatagtgtg
gatgaaaagggatttgaggaatttagaaatagtaggcgtgtaattgaaagatag
DBGET
integrated database retrieval system
