Cajanus cajan (pigeon pea): 109798183
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Entry
109798183 CDS
T04868
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109798183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109798183
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109798183
Prokaryotic type
Archaeal type
TFB
109798183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
109798183
NCBI-ProteinID:
XP_020214026
LinkDB
All DBs
Position
3:complement(14435180..14438917)
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AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGASAEFLSSSLGRWQNRGANPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcgttctgcagcgattgcaagaggcacacggaggtcgtcttcgaccactcc
gccggggacaccgtctgctccgaatgcggcctcgtcttggaatctcactccatcgacgaa
acctccgagtggcgaaccttcgccaacgagtccggcgacaacgaccccgtgcgtgtcggc
ggtccctccaatccgctcctcaccgacggcggcctctccaccgtcatcgccaagcccaac
ggcgcctccgccgagttcctctcctcctccctcggccgctggcagaaccgcggcgccaac
cccgatcgcggcctcatcctcgccttcaaaaccatcgccaccatgtccgataggttggga
cttgttgcaaccatcaaggatcgagcgaatgagatatataaaagggttgaagatcagaag
tctagtagaggaagaaatcaggatgcattattggctgcttgcctctacattgcttgccga
caagaagacaaacctcgcactgtgaaggaaatttgctctgttgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagttaaacaactgggtttggagaagggacaa
tctgtagagatgggaacaatacatgctggggactttatgagacgtttttgttctaatctt
ggtatgaataatcaagctgttaaagctgctcaggaagctgttcagaaatcagaagaattt
gatataaggaggagtcccatatcaattgctgcagcagttatatacatcataactcagctt
tcggatgataaaaagcctctcaaagatatatcagttgccactggagttgcagaaggaacc
attagaaactcatacaaggatctatatccccatgtttcaaaaatcataccaaactggtac
gcaaaggaagaggatttgaagaacctatgcagcccttaa
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